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L1
Euk-VirLeptonychotes_weddellii_papillomavirus_4
L1__YP_009465977__Leptonychotes_weddellii_papillomavirus_4__2077305
Identity
- Accession:
- YP_009465977 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
82.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Leptonychotes_weddellii_papillomavirus_4
TaxID: 2077305
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-112_316-408
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 152.4 | 2.70e-44 | 52.5% | 19.1% |
| PF00500.25 | Late_protein_L1 | 150.2 | 1.20e-43 | 49.2% | 17.5% |
D2
high
residues 117-301
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 236.2 | 1.10e-69 | 100.0% | 36.2% |