L1

Euk-Vir

Miniopterus_schreibersii_papillomavirus_1

L1__YP_009507278__Miniopterus_schreibersii_papillomavirus_1__1195364

Identity

83.4 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Dyotaupapillomavirus› Miniopterus_schreibersii_papillomavirus_1

TaxID: 1195364

View cluster (154 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-65_79-108_306-319_336-403_440-469

PDB

Domain cluster: rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	77.5	1.40e-21	46.7%	19.7%
PF00500.25	Late_protein_L1	89.6	2.90e-25	39.7%	17.1%
PF00500.25	Late_protein_L1	32.1	8.10e-08	17.4%	6.0%

D2 medium residues 66-78_109-155_242-262_286-305_320-335

PDB

Domain cluster: rep: L1__YP_009345082__Eidolon_helvum_papillomavirus_2__1335476__D106-161_251-269_292-310

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	40.3	2.70e-10	41.0%	9.7%

D3 medium residues 156-170_184-241

PDB

Domain cluster: rep: L1__YP_009552560__Gammapapillomavirus_sp.__2049444__D159-250

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00500.25 best	Late_protein_L1	91.1	1.00e-25	100.0%	17.3%