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L1
Euk-VirEidolon_helvum_papillomavirus_1
L1__YP_009507290__Eidolon_helvum_papillomavirus_1__1163701
Identity
- Accession:
- YP_009507290 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
82.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Dyoupsilonpapillomavirus›
Eidolon_helvum_papillomavirus_1
TaxID: 1163701
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-110_313-414_449-476
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 150.7 | 9.10e-44 | 49.8% | 20.3% |
| PF00500.25 | Late_protein_L1 | 130.4 | 1.30e-37 | 37.2% | 15.7% |
| PF00500.25 | Late_protein_L1 | 31.4 | 1.30e-07 | 15.0% | 5.8% |
D2
high
residues 116-151_165-241_255-301
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 147.8 | 6.70e-43 | 100.0% | 36.2% |