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L1
Euk-VirHuman_papillomavirus_172
L1__YP_009507303__Human_papillomavirus_172__1434987
Identity
- Accession:
- YP_009507303 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
84.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Human_papillomavirus_172
TaxID: 1434987
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-111_314-416_451-481
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 119.2 | 3.10e-34 | 48.4% | 19.7% |
| PF00500.25 | Late_protein_L1 | 127.0 | 1.40e-36 | 39.9% | 17.3% |
| PF00500.25 | Late_protein_L1 | 27.4 | 2.10e-06 | 14.8% | 6.0% |
D2
high
residues 118-155_168-233_255-272_284-299
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 110.0 | 2.00e-31 | 76.1% | 22.9% |