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L1

Euk-Vir

Serinus_canaria_papillomavirus_1

L1__YP_009551921__Serinus_canaria_papillomavirus_1__2094713

Identity

Accession:
YP_009551921 ↗
Protein ID:
L1
Kingdom:
euk

Quality

77.0 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Etapapillomavirus› Serinus_canaria_papillomavirus_1

TaxID: 2094713

Cluster

View cluster (154 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-82_103-129_143-164_247-344
PDB
Domain cluster: rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF00500.25 best Late_protein_L1 126.6 1.80e-36 48.1% 20.3%
PF00500.25 Late_protein_L1 82.3 4.70e-23 29.8% 11.7%
PF00500.25 Late_protein_L1 39.9 3.40e-10 25.0% 12.3%
D2 medium residues 83-102_358-385_453-473
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00500.25 best Late_protein_L1 27.0 2.80e-06 46.4% 5.4%
D3 medium residues 165-246
PDB
Domain cluster: rep: putative_L1_late_protein__YP_007518497__Equus_caballus_papillomavirus_6__1235427__D167-232
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00500.25 best Late_protein_L1 116.9 1.60e-33 100.0% 16.7%