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L1
Euk-VirMacaca_mulatta_papillomavirus_4
L1__YP_009551992__Macaca_mulatta_papillomavirus_4__2294152
Identity
- Accession:
- YP_009551992 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
84.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Macaca_mulatta_papillomavirus_4
TaxID: 2294152
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 119-306
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 255.8 | 1.20e-75 | 100.0% | 36.2% |
D2
medium
residues 21-42_84-116_311-328_383-420_454-484
Domain cluster:
rep: unnamed_protein_product__YP_004895386__Canis_familiaris_papillomavirus_10__1087109__D20-62_366-406_443-470
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 37.3 | 2.20e-09 | 29.6% | 8.1% |
| PF00500.25 | Late_protein_L1 | 47.5 | 1.70e-12 | 26.1% | 7.0% |
| PF00500.25 | Late_protein_L1 | 29.0 | 6.80e-07 | 22.5% | 6.2% |