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L1
Euk-VirCanine_papillomavirus_22
L1__YP_009552046__Canine_papillomavirus_22__2304620
Identity
- Accession:
- YP_009552046 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
82.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Taupapillomavirus›
Canine_papillomavirus_22
TaxID: 2304620
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-117_155-166_234-269_309-338_371-409_446-474
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 145.1 | 4.50e-42 | 39.8% | 18.7% |
| PF00500.25 | Late_protein_L1 | 44.1 | 1.80e-11 | 18.6% | 7.2% |
| PF00500.25 | Late_protein_L1 | 40.5 | 2.30e-10 | 18.2% | 8.1% |
| PF00500.25 | Late_protein_L1 | 54.8 | 1.10e-14 | 14.4% | 6.2% |
| PF00500.25 | Late_protein_L1 | 29.4 | 5.20e-07 | 12.7% | 5.8% |
D2
medium
residues 118-154_167-233_270-308
Domain cluster:
rep: L1_protein__YP_006470639__Phocoena_phocoena_papillomavirus_4__706527__D121-153_165-238_287-306
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 117.4 | 1.10e-33 | 83.2% | 24.6% |