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L1
Euk-VirBoa_constrictor_papillomavirus_1
L1__YP_009552072__Boa_constrictor_papillomavirus_1__2294156
Identity
- Accession:
- YP_009552072 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
73.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Dyomupapillomavirus›
Boa_constrictor_papillomavirus_1
TaxID: 2294156
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-109_310-408_439-476
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 137.8 | 7.10e-40 | 49.3% | 20.1% |
| PF00500.25 | Late_protein_L1 | 109.1 | 3.60e-31 | 34.6% | 14.1% |
| PF00500.25 | Late_protein_L1 | 43.6 | 2.70e-11 | 20.0% | 7.6% |
D2
high
residues 116-130_142-268_286-305
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 226.1 | 1.20e-66 | 100.0% | 36.4% |