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L1
Euk-VirGammapapillomavirus_sp.
L1__YP_009552554__Gammapapillomavirus_sp.__2049444
Identity
- Accession:
- YP_009552554 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
82.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Gammapapillomavirus_sp.
TaxID: 2049444
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-111_313-418_454-483
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 146.3 | 1.90e-42 | 48.9% | 20.5% |
| PF00500.25 | Late_protein_L1 | 136.8 | 1.40e-39 | 39.5% | 17.7% |
| PF00500.25 | Late_protein_L1 | 29.3 | 5.70e-07 | 14.8% | 6.4% |