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L1
Euk-VirGammapapillomavirus_sp.
L1__YP_009553025__Gammapapillomavirus_sp.__2049444
Identity
- Accession:
- YP_009553025 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Gammapapillomavirus_sp.
TaxID: 2049444
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-267_286-299
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 218.4 | 2.60e-64 | 99.4% | 31.0% |
D2
medium
residues 60-111_308-344_403-413_450-479
Domain cluster:
rep: unnamed_protein_product__YP_004895386__Canis_familiaris_papillomavirus_10__1087109__D20-62_366-406_443-470
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 76.3 | 3.30e-21 | 41.5% | 10.5% |
| PF00500.25 | Late_protein_L1 | 30.3 | 2.80e-07 | 32.3% | 6.8% |
| PF00500.25 | Late_protein_L1 | 55.4 | 7.20e-15 | 30.8% | 7.2% |