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L1
Euk-VirMacaca_mulatta_papillomavirus_6
L1__YP_009553270__Macaca_mulatta_papillomavirus_6__2364646
Identity
- Accession:
- YP_009553270 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Alphapapillomavirus›
Macaca_mulatta_papillomavirus_6
TaxID: 2364646
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-265_284-295
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 235.4 | 1.90e-69 | 98.1% | 30.2% |
D2
medium
residues 27-44_310-325_369-403_457-470
Domain cluster:
rep: L1__YP_009408622__Felis_catus_papillomavirus_type_5__2025339__D26-43_369-402_442-465
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 40.4 | 2.50e-10 | 44.6% | 7.0% |
D3
medium
residues 45-114_326-368_443-456
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 116.5 | 2.00e-33 | 56.7% | 14.1% |
| PF00500.25 | Late_protein_L1 | 43.9 | 2.10e-11 | 36.2% | 9.3% |