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L1
Euk-VirGammapapillomavirus_sp.
L1__YP_009553528__Gammapapillomavirus_sp.__2049444
Identity
- Accession:
- YP_009553528 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
83.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Gammapapillomavirus›
Gammapapillomavirus_sp.
TaxID: 2049444
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-267_285-299
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 215.3 | 2.30e-63 | 99.4% | 30.8% |
D2
medium
residues 25-82
Domain cluster:
rep: major_capsid_protein__YP_006393294__Human_papillomavirus_136__1070409__D12-70
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 83.1 | 2.80e-23 | 100.0% | 11.7% |