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L1
Euk-VirProcyon_lotor_papillomavirus_1
L1__YP_249604__Procyon_lotor_papillomavirus_1__312349
Identity
- Accession:
- YP_249604 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
84.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Lambdapapillomavirus›
Procyon_lotor_papillomavirus_1
TaxID: 312349
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-55_96-173_186-327_372-383
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 353.8 | 2.40e-105 | 87.2% | 47.3% |
D2
medium
residues 56-95_328-371
Domain cluster:
rep: major_capsid_protein__YP_009408615__Sus_scrofa_papillomavirus_2__2025338__D67-78_99-114_330-371_454-464
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 36.2 | 4.50e-09 | 54.8% | 8.8% |
| PF00500.25 | Late_protein_L1 | 59.1 | 5.40e-16 | 50.0% | 8.1% |