←Back to structures
L1
Euk-VirRousettus_aegyptiacus_papillomavirus_1
L1__YP_717913__Rousettus_aegyptiacus_papillomavirus_1__369584
Identity
- Accession:
- YP_717913 ↗
- Protein ID:
- L1
- Kingdom:
- euk
Quality
78.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Psipapillomavirus›
Rousettus_aegyptiacus_papillomavirus_1
TaxID: 369584
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 148-207_220-304_325-333
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 184.9 | 3.90e-54 | 98.0% | 30.6% |
D2
medium
residues 88-142_342-439_482-508
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 138.1 | 5.70e-40 | 56.1% | 20.3% |
| PF00500.25 | Late_protein_L1 | 89.6 | 3.00e-25 | 31.1% | 11.1% |
| PF00500.25 | Late_protein_L1 | 28.2 | 1.20e-06 | 15.6% | 5.4% |