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L1_protein
Euk-VirFelis_domesticus_papillomavirus_1
L1_protein__NP_848025__Felis_domesticus_papillomavirus_1__2847078
Identity
- Accession:
- NP_848025 ↗
- Protein ID:
- L1_protein
- Kingdom:
- euk
Quality
80.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Lambdapapillomavirus›
Felis_domesticus_papillomavirus_1
TaxID: 2847078
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-94_107-139_335-374_387-434_472-499
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 132.3 | 3.30e-38 | 46.6% | 19.9% |
| PF00500.25 | Late_protein_L1 | 104.0 | 1.30e-29 | 39.3% | 17.7% |
| PF00500.25 | Late_protein_L1 | 35.4 | 8.30e-09 | 15.7% | 5.8% |
D2
high
residues 145-202_217-295_315-322
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 193.1 | 1.30e-56 | 100.0% | 30.2% |