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L1_protein
Euk-VirMustela_putorius_papillomavirus_1
L1_protein__YP_008519315__Mustela_putorius_papillomavirus_1__2259540
Identity
- Accession:
- YP_008519315 ↗
- Protein ID:
- L1_protein
- Kingdom:
- euk
Quality
83.5
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Taupapillomavirus›
Mustela_putorius_papillomavirus_1
TaxID: 2259540
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-117_146-172_326-343_362-414
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 144.6 | 6.40e-42 | 47.6% | 17.5% |
| PF00500.25 | Late_protein_L1 | 77.7 | 1.20e-21 | 38.9% | 18.1% |
| PF00500.25 | Late_protein_L1 | 28.5 | 1.00e-06 | 16.2% | 5.2% |
D2
medium
residues 118-145_254-276_288-325_344-350
Domain cluster:
rep: L1_gene_product__YP_006202695__Papio_hamadryas_papillomavirus_1__990303__D108-155_249-262_283-313_333-358
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 62.8 | 3.90e-17 | 78.1% | 15.9% |
D3
medium
residues 190-253
Domain cluster:
rep: putative_L1_late_protein__YP_007518497__Equus_caballus_papillomavirus_6__1235427__D167-232
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 98.2 | 7.40e-28 | 100.0% | 12.9% |