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L1_protein
Euk-VirGiraffa_camelopardalis_papillomavirus_1
L1_protein__YP_009508741__Giraffa_camelopardalis_papillomavirus_1__1922325
Identity
- Accession:
- YP_009508741 ↗
- Protein ID:
- L1_protein
- Kingdom:
- euk
Quality
84.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Deltapapillomavirus›
Giraffa_camelopardalis_papillomavirus_1
TaxID: 1922325
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-108_309-407_443-465
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 147.5 | 8.30e-43 | 55.9% | 20.1% |
| PF00500.25 | Late_protein_L1 | 97.3 | 1.40e-27 | 34.9% | 13.1% |
D2
high
residues 114-264_285-296
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 227.7 | 4.10e-67 | 97.5% | 30.6% |