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L1_protein
Euk-VirTalpa_europaea_papillomavirus_1
L1_protein__YP_009508754__Talpa_europaea_papillomavirus_1__1338506
Identity
- Accession:
- YP_009508754 ↗
- Protein ID:
- L1_protein
- Kingdom:
- euk
Quality
83.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Dyophipapillomavirus›
Talpa_europaea_papillomavirus_1
TaxID: 1338506
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-113_309-400
Domain cluster:
rep: L1_capsid_protein__YP_009272579__Bos_taurus_papillomavirus_13__1887213__D32-107_305-401_440-463
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 138.5 | 4.40e-40 | 50.5% | 19.1% |
| PF00500.25 | Late_protein_L1 | 148.8 | 3.30e-43 | 49.5% | 17.5% |
D2
high
residues 120-298
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 249.9 | 7.70e-74 | 100.0% | 36.2% |