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LC121084.1__BAU39963.1__X__00005

Bact-Vir

LC121084.1__BAU39963.1__X__00005

Identity

Accession:
LC121084 ↗
Kingdom:
phage

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 82-152
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cr4A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.70 52.0 4.63e-01 78.9% 71.7%
3wknF00 6.20.50.120 Special › Other non-globular › N-terminal domain of TfIIb › 0.67 39.0 4.69e-01 83.1% 89.1%
6aikB00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.64 56.0 3.71e-01 100.0% 85.4%
4ftfA00 3.30.300.250 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.61 44.0 3.89e-01 77.5% 93.6%
2g5xA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.61 44.0 3.46e-01 80.3% 86.6%
1t62B00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.61 51.0 3.91e-01 93.0% 82.8%
6l4lA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.61 48.0 4.05e-01 93.0% 88.2%
1h9oA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 49.0 4.34e-01 94.4% 68.5%
2gjwC01 3.40.1350.150 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.59 43.0 3.46e-01 77.5% 85.0%
3cr8A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.59 44.0 3.58e-01 81.7% 75.9%
1q7hA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.59 43.0 4.09e-01 78.9% 93.0%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.58 46.0 3.68e-01 85.9% 93.6%
3ib5A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.58 48.0 3.23e-01 100.0% 71.9%
4esjA01 3.40.210.30 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain 0.57 47.0 3.80e-01 97.2% 73.7%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.57 43.0 4.42e-01 80.3% 98.5%
3vseA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.57 43.0 4.35e-01 81.7% 98.6%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.56 45.0 4.15e-01 90.1% 98.9%
3zv0C01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.56 42.0 3.35e-01 81.7% 51.3%
2apoA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.56 41.0 3.71e-01 78.9% 75.8%
1sqwA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.55 40.0 3.91e-01 80.3% 96.4%
1sgvA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.55 40.0 4.26e-01 85.9% 88.9%
5zveA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.55 42.0 3.99e-01 84.5% 90.7%
1r3fA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.54 41.0 4.25e-01 83.1% 95.4%
1iq8A04 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.54 40.0 3.91e-01 80.3% 97.4%
2p38A02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.54 38.0 4.01e-01 76.1% 100.0%
4nocD00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.54 44.0 3.57e-01 91.5% 65.0%
2j5vA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.54 41.0 3.82e-01 85.9% 100.0%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.53 39.0 3.92e-01 78.9% 97.1%
3e0jA01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.53 43.0 3.00e-01 98.6% 84.3%
3c0kA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.52 39.0 3.92e-01 81.7% 97.2%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.52 43.0 3.37e-01 94.4% 58.0%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 40.0 3.57e-01 88.7% 78.8%
8be0A01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.52 43.0 3.29e-01 98.6% 51.8%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.51 39.0 3.60e-01 85.9% 80.0%
2ymaA00 3.10.310.60 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.51 41.0 3.45e-01 93.0% 68.9%
4dmgA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.50 41.0 4.17e-01 91.5% 97.2%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 44.0 2.86e-01 100.0% 78.3%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4480273 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 51.0 5.30e-01 78.9% 98.5%
4978781 2492.1.1.18 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.65 57.0 4.38e-01 98.6% 46.9%
4312009 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 49.0 5.01e-01 81.7% 97.1%
4081828 3421.1.1.1 a+b complex topology › Yos9 dimerization domain › Yos9 dimerization domain › Yos9 dimerization domain › Yos9_DD 0.64 46.0 3.78e-01 76.1% 69.6%
5038175 2008.2.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like 0.64 43.0 4.21e-01 74.6% 62.5%
4582116 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.63 46.0 4.82e-01 78.9% 96.9%
3479718 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.63 46.0 3.96e-01 80.3% 54.2%
4361032 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.63 49.0 5.00e-01 85.9% 98.6%
3201517 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.62 51.0 3.59e-01 95.8% 68.8%
4078129 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.62 46.0 4.86e-01 80.3% 93.8%
3667063 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 48.0 3.27e-01 88.7% 48.5%
3579857 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.62 53.0 3.66e-01 100.0% 85.0%
4932684 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.62 47.0 4.63e-01 81.7% 98.7%
3477642 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 47.0 4.03e-01 84.5% 57.5%
3600186 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.61 49.0 4.49e-01 90.1% 84.2%
2667421 286.1.1.5 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N 0.61 48.0 3.91e-01 91.5% 79.9%
3436132 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 46.0 3.11e-01 88.7% 43.3%
4549466 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.60 45.0 4.61e-01 80.3% 95.7%
4671607 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.60 46.0 4.92e-01 81.7% 98.3%
4069291 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.60 46.0 4.99e-01 85.9% 98.3%
5011041 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.59 44.0 4.20e-01 80.3% 95.3%
4632972 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.59 43.0 4.44e-01 78.9% 100.0%
3957910 316.1.1.26 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › SMODS 0.59 49.0 4.12e-01 91.5% 91.7%
4558844 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.59 44.0 4.63e-01 81.7% 96.9%
3603793 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.59 45.0 4.60e-01 84.5% 97.1%
4204421 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.58 43.0 4.66e-01 80.3% 96.7%
2469837 3148.1.1.2 a+b two layers › putative secreted protein PA3611 › putative secreted protein PA3611 › putative secreted protein PA3611 › T2SSS_2 0.58 42.0 3.76e-01 78.9% 90.0%
4564300 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.58 46.0 4.45e-01 85.9% 98.8%
4385298 3421.1.1.1 a+b complex topology › Yos9 dimerization domain › Yos9 dimerization domain › Yos9 dimerization domain › Yos9_DD 0.58 47.0 3.94e-01 90.1% 77.6%
4025794 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.58 43.0 4.32e-01 78.9% 98.6%
4958559 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.57 42.0 4.07e-01 78.9% 95.0%
1503110 2008.1.1.21 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnI 0.57 47.0 3.70e-01 97.2% 66.9%
4990786 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.57 49.0 3.94e-01 100.0% 95.3%
186 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.57 42.0 4.35e-01 80.3% 98.5%
4977675 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.57 43.0 3.94e-01 81.7% 82.1%
869287 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.57 43.0 4.31e-01 81.7% 95.8%
3937121 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.57 43.0 4.09e-01 85.9% 68.9%
4054728 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.57 43.0 4.55e-01 81.7% 100.0%
4234045 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.57 43.0 4.63e-01 81.7% 96.7%
5051591 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.56 41.0 3.96e-01 77.5% 96.2%
4101732 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.56 41.0 4.18e-01 78.9% 97.1%
5042356 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.56 43.0 4.35e-01 84.5% 100.0%
5077746 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.56 42.0 4.09e-01 80.3% 97.4%
5036485 3688.1.1.0 a+b two layers › N-terminal subdomain in UbiD middle domain › N-terminal subdomain in UbiD middle domain › N-terminal subdomain in UbiD middle domain 0.56 37.0 3.71e-01 73.2% 65.3%
4963284 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.56 42.0 4.18e-01 81.7% 98.6%
4165251 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.56 41.0 4.31e-01 80.3% 95.4%
4943383 1.1.9.53 beta barrels › cradle loop barrel › RIFT-related › PUA domain › Methyltr_RsmB-F 0.56 43.0 3.94e-01 84.5% 83.2%
5011405 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.56 42.0 4.22e-01 80.3% 97.1%
5083059 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.56 41.0 3.94e-01 80.3% 94.1%
3595077 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.55 42.0 3.68e-01 81.7% 70.4%
4024158 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.55 41.0 4.05e-01 84.5% 92.5%
4948219 1.1.9.54 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PAPS_reduct 0.55 40.0 4.02e-01 78.9% 100.0%
369229 3535.1.1.1 a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS 0.55 43.0 3.74e-01 90.1% 97.5%
4995416 1.1.9.6 beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 0.55 40.0 4.02e-01 80.3% 97.3%
4943208 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.55 40.0 3.94e-01 77.5% 100.0%
4432484 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.55 41.0 4.37e-01 81.7% 100.0%
3278644 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.54 43.0 3.33e-01 91.5% 53.3%
4585687 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.54 40.0 4.01e-01 81.7% 94.7%
3656902 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.54 43.0 3.84e-01 91.5% 87.0%
3965169 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.54 39.0 4.18e-01 78.9% 100.0%
4048693 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.54 43.0 4.41e-01 91.5% 95.7%
4103393 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.54 41.0 4.41e-01 85.9% 98.3%
3968199 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.54 42.0 4.22e-01 90.1% 97.3%
4995302 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.53 46.0 3.59e-01 100.0% 91.8%
4517955 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 40.0 4.02e-01 81.7% 100.0%
4620744 1.1.9.11 beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.53 40.0 4.29e-01 87.3% 98.3%
5054628 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.53 41.0 3.95e-01 85.9% 90.6%
187 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.53 39.0 3.94e-01 81.7% 95.8%
3704715 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 41.0 3.14e-01 100.0% 34.4%
4490064 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.52 41.0 3.98e-01 85.9% 100.0%
5065820 244.4.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 0.52 36.0 2.78e-01 74.6% 31.4%
3671668 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 40.0 3.00e-01 84.5% 64.3%
4988848 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 38.0 3.95e-01 78.9% 92.3%
3666657 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.52 41.0 3.80e-01 91.5% 82.1%
4069253 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.51 41.0 3.66e-01 91.5% 93.5%
4956000 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.51 38.0 3.92e-01 81.7% 98.6%
5064174 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.51 40.0 3.73e-01 87.3% 90.4%
4181300 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.51 38.0 2.68e-01 83.1% 53.1%
3197762 7502.1.1.7 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 0.51 39.0 3.46e-01 87.3% 74.8%
150962 1.1.9.17 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.51 41.0 4.18e-01 90.1% 98.6%
3803056 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 42.0 2.95e-01 98.6% 71.1%
4564801 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.50 37.0 3.52e-01 91.5% 63.2%
4983181 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.50 41.0 3.52e-01 93.0% 75.8%
D2 high residues 156-249
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.85 78.0 7.32e-01 100.0% 91.2%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 55.0 4.79e-01 79.8% 73.9%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.70 43.0 4.52e-01 100.0% 68.2%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.68 55.0 4.08e-01 87.2% 87.5%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.66 49.0 3.69e-01 77.7% 49.3%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.64 48.0 3.71e-01 78.7% 100.0%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.63 50.0 3.68e-01 85.1% 43.8%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.63 43.0 3.90e-01 100.0% 51.5%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 4.49e-01 100.0% 70.1%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.61 52.0 4.28e-01 90.4% 71.6%
7altB01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 45.0 3.85e-01 78.7% 57.0%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.60 53.0 4.03e-01 94.7% 58.2%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.60 52.0 3.90e-01 92.6% 54.8%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.60 51.0 3.83e-01 92.6% 53.1%
5mw5A01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 44.0 3.81e-01 78.7% 60.3%
2dd7A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 51.0 3.85e-01 92.6% 56.5%
4xl1E01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 3.74e-01 78.7% 63.9%
2c9jA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 51.0 3.89e-01 94.7% 57.7%
3hwuA00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.58 52.0 4.50e-01 100.0% 75.7%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 48.0 3.86e-01 90.4% 85.8%
3htnB00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.57 51.0 4.49e-01 100.0% 74.8%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.57 45.0 3.29e-01 85.1% 98.8%
7alkA01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 3.52e-01 79.8% 96.2%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 42.0 3.51e-01 85.1% 89.8%
2qdeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 42.0 3.66e-01 80.9% 97.1%
1f9cA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 39.0 3.58e-01 75.5% 97.5%
2x1cB01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.54 43.0 3.13e-01 88.3% 75.9%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 43.0 3.48e-01 87.2% 85.9%
2p0lA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 46.0 3.34e-01 95.7% 71.8%
3dgcS01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.65e-01 73.4% 91.2%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.53 39.0 3.29e-01 94.7% 43.4%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 47.0 4.11e-01 100.0% 70.4%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.13e-01 100.0% 97.1%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.34e-01 100.0% 56.2%
1g0dA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 46.0 4.11e-01 100.0% 68.6%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.52 41.0 3.19e-01 88.3% 87.4%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.52 45.0 4.11e-01 100.0% 76.5%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.51 45.0 4.06e-01 100.0% 79.3%
5tfmA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.51 41.0 4.12e-01 100.0% 84.7%
1i1nA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 38.0 2.87e-01 95.7% 33.0%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.88e-01 100.0% 62.5%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 44.0 3.67e-01 100.0% 77.6%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 34.0 3.28e-01 70.2% 97.3%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
441034 3386.1.1.4 beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C 0.85 78.0 7.18e-01 100.0% 86.7%
4958640 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.68 58.0 4.62e-01 90.4% 97.7%
5012521 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.67 55.0 4.06e-01 88.3% 96.6%
4176285 11.1.1.1032 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2544 0.66 56.0 5.03e-01 95.7% 85.2%
1178585 227.1.1.13 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_DNAp_acc 0.65 38.0 3.26e-01 79.8% 38.3%
3949003 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.65 58.0 4.56e-01 100.0% 82.0%
3849839 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.64 49.0 4.82e-01 80.9% 97.0%
3444541 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.64 47.0 3.69e-01 77.7% 46.0%
3299711 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.63 47.0 4.19e-01 79.8% 98.5%
3683603 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 43.0 2.75e-01 73.4% 80.0%
4943783 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.61 45.0 4.06e-01 78.7% 68.4%
1157836 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.60 51.0 4.28e-01 90.4% 71.8%
1283375 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.60 52.0 3.90e-01 92.6% 54.3%
358775 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.60 51.0 4.19e-01 91.5% 67.5%
28728 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 51.0 3.90e-01 92.6% 56.1%
2879296 10.32.1.78 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PirA-like 0.59 53.0 5.25e-01 97.9% 98.0%
308837 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 52.0 3.89e-01 94.7% 56.4%
3931229 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 40.0 2.64e-01 70.2% 97.2%
3185314 10.1.1.16 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 0.58 49.0 3.81e-01 93.6% 81.3%
297731 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.58 51.0 3.86e-01 94.7% 57.7%
None 0.58 44.0 2.62e-01 78.7% 46.6%
3645446 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.58 43.0 3.83e-01 80.9% 79.3%
4438077 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.57 39.0 2.58e-01 71.3% 93.2%
3672945 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 39.0 2.98e-01 71.3% 34.5%
3671250 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.56 39.0 3.42e-01 71.3% 55.9%
5076433 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.56 42.0 3.59e-01 80.9% 96.2%
3287683 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 3.79e-01 73.4% 77.1%
4945064 10.1.2.192 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Big_7 0.55 48.0 4.58e-01 100.0% 94.8%
3233763 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 3.92e-01 100.0% 67.0%
3227152 10.4.1.19 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein 0.55 48.0 4.52e-01 100.0% 80.9%
None 0.55 38.0 3.35e-01 71.3% 55.9%
3259125 11.1.1.31 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 0.54 44.0 4.23e-01 100.0% 76.4%
3338071 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.54 38.0 3.22e-01 71.3% 49.7%
3798452 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 37.0 3.40e-01 72.3% 73.3%
3505571 11.2.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.54 40.0 3.63e-01 83.0% 99.3%
3665166 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 40.0 2.80e-01 78.7% 67.9%
3805853 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.54 46.0 3.76e-01 100.0% 64.1%
3377134 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.54 42.0 3.66e-01 100.0% 54.0%
2082911 11.2.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.53 39.0 3.45e-01 80.9% 100.0%
1322957 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 47.0 4.11e-01 100.0% 70.4%
3516180 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.52 36.0 3.54e-01 71.3% 77.9%
5040016 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 43.0 3.79e-01 95.7% 96.8%
3924473 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 47.0 3.75e-01 100.0% 75.3%
3927507 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 36.0 3.48e-01 81.9% 63.8%
3925547 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.52 35.0 2.84e-01 70.2% 41.0%
4003166 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.51 45.0 4.13e-01 100.0% 79.2%
5053926 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.50 36.0 3.83e-01 80.9% 87.5%