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LC121084.1__BAU40043.1__X__00085

Bact-Vir

LC121084.1__BAU40043.1__X__00085

Identity

Accession:
LC121084 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Ralstonia_phage_RSP15

TaxID: 1785960

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 92-251
PDB
Domain cluster: rep: OQ508957.1__WGH49903.1__X__00187__D10-156
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26869.1 best Phage_T4_gp2 91.0 9.00e-26 95.6% 50.2%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 30.0 4.58e-01 86.3% 96.8%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 30.0 4.66e-01 77.5% 100.0%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 29.0 4.61e-01 73.8% 100.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 32.0 4.76e-01 92.5% 100.0%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 32.0 4.68e-01 91.3% 100.0%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.66 34.0 4.72e-01 79.4% 100.0%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 27.0 3.85e-01 83.7% 100.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 26.0 3.77e-01 75.6% 100.0%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 37.0 3.87e-01 80.6% 76.7%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 35.0 3.66e-01 79.4% 73.3%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 29.0 3.33e-01 74.4% 75.0%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.51 37.0 3.81e-01 95.0% 78.1%
2z84A00 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 36.0 3.26e-01 80.0% 54.8%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 40.0 5.56e-01 79.4% 100.0%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 31.0 4.59e-01 75.0% 87.1%
3495447 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 34.0 3.94e-01 79.4% 58.3%
4501723 4.8.1.45 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.74 28.0 4.68e-01 72.5% 100.0%
3798312 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 34.0 4.96e-01 76.9% 98.6%
3629536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 35.0 4.51e-01 81.9% 76.8%
4152374 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 39.0 5.36e-01 78.1% 100.0%
3507146 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 34.0 4.52e-01 81.9% 83.5%
3907176 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.69 39.0 5.14e-01 78.8% 100.0%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 37.0 4.41e-01 75.0% 80.9%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 27.0 4.05e-01 73.8% 96.9%
3491615 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 37.0 3.15e-01 95.0% 37.2%
3471772 4.1.1.311 ↗ beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.60 33.0 4.33e-01 76.9% 95.6%
3670468 4.1.1.332 ↗ beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.59 35.0 3.84e-01 79.4% 71.5%
4563194 274.1.1.40 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › 17kDa_Anti_2 0.59 27.0 3.47e-01 87.5% 73.4%
3390463 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.57 24.0 3.64e-01 99.4% 95.4%
3501834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 29.0 3.90e-01 71.9% 92.9%
3999482 4.1.1.311 ↗ beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.56 36.0 4.19e-01 81.2% 91.8%
3490245 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 30.0 3.89e-01 76.2% 92.2%
3510024 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.56 34.0 4.07e-01 80.0% 89.1%
3521904 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 32.0 3.98e-01 78.1% 93.7%
3612182 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 31.0 4.04e-01 70.6% 100.0%
3931053 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.54 34.0 4.12e-01 76.9% 100.0%
3621303 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 31.0 3.43e-01 78.8% 70.0%
3334435 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.53 38.0 3.90e-01 80.6% 76.1%
3824811 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.53 36.0 3.74e-01 80.6% 72.3%
3313137 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.53 35.0 3.56e-01 81.2% 66.9%
3992087 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.52 36.0 3.59e-01 81.2% 66.5%
3330137 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.52 36.0 3.62e-01 81.2% 70.0%
3460287 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.51 36.0 3.70e-01 96.2% 72.5%
3670066 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.51 36.0 3.65e-01 96.9% 72.9%
3823515 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.50 36.0 3.73e-01 96.2% 76.8%