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LC121084.1__BAU40080.1__X__00122

Bact-Vir

LC121084.1__BAU40080.1__X__00122

Identity

Accession:
LC121084 ↗
Kingdom:
phage

Quality

52.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Ralstonia_phage_RSP15

TaxID: 1785960

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 234-309
PDB
Domain cluster: rep: BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00111__D83-144
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vh6A01 6.10.140.1940 Special › Helix non-globular › Helix Hairpins › 0.54 38.0 3.52e-01 73.7% 58.8%
2ondA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 41.0 2.93e-01 97.4% 72.1%
2kj8A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.51 37.0 3.38e-01 84.2% 78.8%
4cmyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 40.0 3.20e-01 88.2% 87.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5048255 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 62.0 4.11e-01 100.0% 73.7%
4276585 3579.1.1.1 ↗ extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 0.55 40.0 2.85e-01 75.0% 77.6%
3682815 109.59.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Glyco_hydro_9 0.51 41.0 3.15e-01 88.2% 45.0%