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LC168164.1__BAV39354.1__BPT24_234__00230

Bact-Vir

LC168164.1__BAV39354.1__BPT24_234__00230

Identity

Accession:
LC168164 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-66
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14902.13 best DUF4494 30.8 3.30e-07 100.0% 40.3%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.79 64.0 6.07e-01 100.0% 75.0%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.78 57.0 5.94e-01 100.0% 83.3%
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.75 68.0 6.26e-01 100.0% 98.8%
2zw2A00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.73 67.0 6.10e-01 100.0% 98.8%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.73 62.0 5.82e-01 100.0% 75.9%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.69 59.0 3.92e-01 100.0% 40.0%
1t4aA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.67 58.0 5.46e-01 95.4% 100.0%
1pu4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.67 51.0 3.11e-01 100.0% 13.3%
5e1qA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 45.0 3.92e-01 100.0% 49.0%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.64 56.0 4.57e-01 100.0% 96.0%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.63 53.0 3.76e-01 100.0% 36.0%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.63 48.0 2.85e-01 100.0% 10.7%
2zaiA04 2.60.40.3030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 53.0 4.32e-01 100.0% 65.9%
2xzmZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.61 44.0 3.95e-01 86.2% 52.6%
4hljA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 3.72e-01 100.0% 45.5%
1mt1B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.60 53.0 4.47e-01 100.0% 73.2%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 46.0 2.75e-01 100.0% 10.6%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 4.05e-01 100.0% 66.4%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.70e-01 100.0% 43.2%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.59 45.0 3.83e-01 100.0% 50.9%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.58 49.0 4.10e-01 100.0% 52.8%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.58 37.0 3.64e-01 96.9% 57.5%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.57 44.0 3.29e-01 84.6% 32.8%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 3.86e-01 100.0% 65.1%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 45.0 4.02e-01 100.0% 61.1%
1kf6B01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.56 49.0 4.24e-01 100.0% 79.8%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.56 42.0 3.38e-01 84.6% 44.5%
3j7aZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.55 43.0 4.20e-01 86.2% 80.6%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.55 47.0 2.89e-01 96.9% 33.7%
1fm4A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 41.0 3.19e-01 84.6% 91.2%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.54 44.0 3.40e-01 96.9% 48.8%
2v0uA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 3.15e-01 84.6% 35.6%
4dzdA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.53 44.0 3.68e-01 96.9% 98.4%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.53 45.0 3.70e-01 100.0% 87.6%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.53 47.0 3.71e-01 100.0% 48.9%
2kltA00 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.52 46.0 3.53e-01 100.0% 41.7%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 3.45e-01 96.9% 60.5%
3e1uA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 43.0 3.24e-01 98.5% 38.0%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.32e-01 98.5% 81.4%
1xf1A03 2.60.40.1710 Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily 0.51 42.0 3.51e-01 100.0% 57.3%
1egjA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.44e-01 100.0% 55.4%
3r8yA01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.50 43.0 4.34e-01 100.0% 97.0%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.50 42.0 3.41e-01 100.0% 49.3%
7uclA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 36.0 3.26e-01 81.5% 53.9%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3517068 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.87 74.0 7.42e-01 100.0% 90.8%
3280008 3115.1.1.2 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 0.83 78.0 6.84e-01 100.0% 81.1%
4084879 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.81 71.0 6.40e-01 100.0% 71.8%
5080205 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.80 56.0 6.22e-01 100.0% 94.0%
5033281 304.100.1.1 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.76 68.0 6.83e-01 100.0% 96.9%
4941949 304.100.1.1 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.75 66.0 6.16e-01 95.4% 100.0%
159110 304.100.1.1 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.75 68.0 6.26e-01 100.0% 98.8%
4942818 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.74 65.0 5.00e-01 100.0% 45.0%
3929121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 4.71e-01 100.0% 47.8%
1442666 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.73 62.0 5.76e-01 100.0% 74.1%
3216210 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.72 52.0 5.76e-01 96.9% 100.0%
4947546 304.100.1.0 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like 0.72 65.0 5.90e-01 98.5% 98.8%
3892842 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.69 57.0 5.72e-01 100.0% 92.3%
3874464 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.63 55.0 3.48e-01 100.0% 18.3%
3297150 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 46.0 4.02e-01 86.2% 51.0%
3600766 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 51.0 3.66e-01 89.2% 35.3%
4332626 3532.1.1.0 alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase 0.63 54.0 3.17e-01 100.0% 10.9%
3846627 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 46.0 4.04e-01 100.0% 52.0%
3299532 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 49.0 4.18e-01 100.0% 51.8%
3991293 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 46.0 3.80e-01 100.0% 42.4%
4013242 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 54.0 4.53e-01 100.0% 58.3%
1727258 11.14.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domains in STT3 › Ig-like domains in STT3 › OST_P2 0.61 52.0 4.14e-01 100.0% 59.3%
1503409 220.3.1.1 beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop 0.61 50.0 4.09e-01 95.4% 93.2%
3702482 2492.1.1.34 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › LmjF365940-deam 0.60 52.0 3.84e-01 100.0% 37.2%
4145438 3747.1.1.3 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bbr_C 0.60 40.0 3.50e-01 89.2% 45.0%
143824 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.60 46.0 2.77e-01 100.0% 11.5%
3879431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 45.0 3.94e-01 100.0% 52.4%
4985428 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.59 50.0 4.77e-01 100.0% 82.1%
3818973 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.59 49.0 4.02e-01 98.5% 56.9%
3529423 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 51.0 4.09e-01 100.0% 79.2%
3398840 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 44.0 3.88e-01 100.0% 53.3%
3174953 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.57 43.0 2.99e-01 89.2% 23.1%
3418391 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.57 48.0 4.00e-01 100.0% 59.2%
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 49.0 4.14e-01 98.5% 62.7%
3896560 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.56 50.0 3.69e-01 100.0% 58.2%
5018729 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.55 42.0 3.52e-01 81.5% 83.6%
4980390 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 3.99e-01 98.5% 85.2%
3714678 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 49.0 2.98e-01 100.0% 15.3%
4932514 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.55 48.0 3.99e-01 100.0% 78.3%
4029586 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.54 46.0 3.62e-01 98.5% 75.3%
5045979 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.54 44.0 2.98e-01 93.8% 39.3%
3982100 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.54 44.0 3.55e-01 100.0% 44.7%
3212628 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.73e-01 100.0% 61.6%
3929299 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.53 46.0 3.19e-01 100.0% 33.9%
3969252 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.53 41.0 3.25e-01 84.6% 40.7%
3597361 4.23.1.0 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like 0.53 46.0 3.71e-01 100.0% 71.5%
4028378 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.53 46.0 3.72e-01 100.0% 73.8%
3200774 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 37.0 2.32e-01 76.9% 13.5%
3700518 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.52 46.0 3.70e-01 100.0% 71.5%
3269973 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.52 46.0 4.05e-01 98.5% 98.9%
3585284 10.40.1.1 beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.52 44.0 3.25e-01 98.5% 35.8%
4456175 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 43.0 3.13e-01 100.0% 32.7%
3613140 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.52 38.0 2.38e-01 78.5% 75.1%
3506980 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.52 44.0 3.47e-01 100.0% 44.1%
3411973 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.51 42.0 3.10e-01 98.5% 33.7%
4027717 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 46.0 3.05e-01 100.0% 43.5%
3164234 205.1.1.100 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_2, Fer4_11 0.50 39.0 2.91e-01 90.8% 76.5%
3601949 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 3.20e-01 90.8% 86.2%
3501494 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 3.39e-01 100.0% 49.6%
D2 high residues 70-142
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.78 59.0 6.37e-01 84.9% 96.7%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.74 57.0 3.84e-01 83.6% 43.6%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 57.0 5.66e-01 86.3% 94.7%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.70 58.0 5.96e-01 90.4% 97.2%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.69 47.0 5.35e-01 84.9% 98.1%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.69 51.0 3.64e-01 80.8% 39.0%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 43.0 3.61e-01 76.7% 39.0%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.66 52.0 5.06e-01 83.6% 83.5%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.65 50.0 3.77e-01 84.9% 61.7%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 47.0 4.93e-01 78.1% 85.1%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.65 30.0 3.11e-01 80.8% 42.6%
5jgfA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.63 48.0 3.89e-01 83.6% 76.6%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 47.0 4.51e-01 79.5% 100.0%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 48.0 3.94e-01 86.3% 99.3%
4xurA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 45.0 3.46e-01 76.7% 64.0%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 45.0 4.13e-01 78.1% 64.2%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.61 44.0 3.85e-01 83.6% 50.5%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.61 45.0 3.48e-01 80.8% 49.4%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.60 43.0 3.67e-01 76.7% 78.9%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.60 43.0 3.81e-01 78.1% 71.4%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.60 42.0 3.66e-01 75.3% 58.8%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 41.0 3.28e-01 72.6% 61.2%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 48.0 3.85e-01 91.8% 94.6%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.59 42.0 3.90e-01 76.7% 64.6%
4hscX04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.58 46.0 4.06e-01 86.3% 63.6%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 43.0 3.56e-01 78.1% 79.4%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.58 47.0 3.68e-01 90.4% 84.6%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.58 42.0 3.44e-01 87.7% 39.9%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 46.0 3.04e-01 86.3% 60.1%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 45.0 3.02e-01 84.9% 37.7%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 45.0 2.93e-01 86.3% 61.1%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.57 47.0 4.10e-01 90.4% 64.9%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 3.78e-01 80.8% 57.3%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 44.0 3.86e-01 83.6% 57.8%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 39.0 3.42e-01 76.7% 47.2%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 40.0 3.25e-01 74.0% 87.5%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 40.0 3.71e-01 75.3% 65.6%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 42.0 3.80e-01 80.8% 58.8%
1n9pA00 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.55 41.0 3.10e-01 82.2% 67.0%
1p1hB01 3.30.2360.10 Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain 0.55 40.0 3.11e-01 78.1% 84.7%
2vg9A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.55 42.0 3.09e-01 84.9% 58.1%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.55e-01 80.8% 53.3%
3waiA02 2.60.40.3390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.67e-01 76.7% 61.3%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 42.0 3.34e-01 83.6% 57.9%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 41.0 3.06e-01 83.6% 30.9%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.54 40.0 3.19e-01 80.8% 47.2%
1fuiA03 3.20.14.10 Alpha Beta › Alpha-Beta Barrel › L-fucose Isomerase; Chain A, domain 3 › L-fucose/L-arabinose isomerase, C-terminal 0.54 44.0 3.01e-01 87.7% 61.8%
7ui8A01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.48e-01 75.3% 61.8%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.42e-01 78.1% 61.4%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.49e-01 82.2% 58.1%
3n77A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 41.0 3.38e-01 87.7% 93.6%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 40.0 2.70e-01 84.9% 61.3%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.52 40.0 3.80e-01 84.9% 86.5%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 34.0 2.87e-01 76.7% 35.0%
1vc9A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 39.0 3.36e-01 83.6% 54.1%
4mpoB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 41.0 3.42e-01 95.9% 91.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3508212 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.89 78.0 7.95e-01 91.8% 100.0%
3280008 3115.1.1.2 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 0.86 69.0 6.40e-01 84.9% 90.0%
4995671 3115.1.1.12 a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 0.85 57.0 6.67e-01 80.8% 100.0%
3517068 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.76 58.0 6.12e-01 82.2% 100.0%
5000510 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.75 60.0 6.02e-01 86.3% 94.7%
4084879 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.74 60.0 5.69e-01 87.7% 87.1%
4990637 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 58.0 5.63e-01 87.7% 88.0%
2741079 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.71 55.0 5.61e-01 83.6% 94.4%
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 55.0 4.80e-01 86.3% 72.7%
3929121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 4.76e-01 87.7% 55.7%
4847775 2487.1.1.12 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › ZNRF_3_ecto 0.68 49.0 3.80e-01 75.3% 98.7%
5010503 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 49.0 4.48e-01 76.7% 69.5%
1442666 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.67 52.0 5.02e-01 83.6% 82.7%
3846579 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.66 50.0 3.77e-01 80.8% 55.3%
3509590 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.65 49.0 3.76e-01 79.5% 56.2%
3210984 2487.1.1.0 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.65 49.0 3.77e-01 79.5% 100.0%
4960416 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 45.0 4.27e-01 82.2% 60.7%
4332626 3532.1.1.0 alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase 0.64 56.0 3.33e-01 98.6% 29.9%
3936898 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.64 47.0 3.52e-01 76.7% 42.9%
4942818 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.64 55.0 4.38e-01 93.2% 55.7%
4976844 303.1.1.1 a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC 0.63 56.0 4.31e-01 100.0% 70.3%
3892842 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.63 49.0 5.18e-01 86.3% 100.0%
3212564 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.63 46.0 3.62e-01 76.7% 48.0%
4465843 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.62 54.0 5.11e-01 98.6% 88.9%
3619496 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 53.0 3.34e-01 93.2% 28.7%
4115421 11.15.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C 0.62 48.0 4.15e-01 83.6% 60.0%
3278677 72.1.1.0 beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.62 42.0 3.99e-01 89.0% 60.0%
3396683 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.60 50.0 4.96e-01 94.5% 89.9%
3578165 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.60 45.0 3.50e-01 79.5% 57.5%
5079504 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.60 49.0 3.95e-01 94.5% 47.5%
3648159 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 42.0 3.56e-01 75.3% 64.6%
1108811 11.15.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C 0.59 45.0 3.98e-01 82.2% 57.8%
3264178 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 42.0 3.43e-01 75.3% 61.4%
3874464 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.59 50.0 3.30e-01 100.0% 40.6%
3470279 302.1.1.0 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.59 43.0 3.61e-01 79.5% 66.2%
3991293 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 3.93e-01 87.7% 51.2%
4035839 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.58 41.0 3.61e-01 75.3% 53.9%
3999331 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.58 44.0 3.66e-01 79.5% 72.8%
3914225 10.32.1.283 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TGFb_propeptide 0.58 42.0 3.52e-01 79.5% 85.2%
3410016 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.58 43.0 3.31e-01 79.5% 54.1%
4078508 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.58 42.0 3.68e-01 80.8% 50.4%
5045949 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 3.65e-01 75.3% 57.1%
4939155 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.57 41.0 3.53e-01 75.3% 52.1%
2557261 807.1.1.1 a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.57 45.0 4.19e-01 84.9% 68.5%
4977520 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.57 41.0 3.66e-01 78.1% 56.4%
4568546 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.57 41.0 3.57e-01 78.1% 51.3%
3483628 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.56 41.0 3.48e-01 78.1% 59.2%
5049412 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.56 41.0 3.49e-01 78.1% 49.6%
4384861 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.56 42.0 2.69e-01 79.5% 80.0%
3873657 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.56 43.0 3.10e-01 83.6% 50.2%
4927135 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.41e-01 95.9% 75.8%
4022200 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 36.0 3.47e-01 79.5% 56.5%
5005269 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.55 47.0 3.78e-01 93.2% 79.3%
1883531 11.15.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C 0.55 42.0 3.78e-01 86.3% 63.6%
3752271 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 42.0 3.19e-01 86.3% 42.1%
115 1.1.7.18 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Fucose_iso_C 0.54 44.0 3.05e-01 87.7% 65.7%
4333681 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.54 39.0 3.43e-01 79.5% 51.7%
3448678 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 40.0 3.28e-01 80.8% 47.6%
3895559 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.53 40.0 2.85e-01 80.8% 72.1%
4424212 2492.1.1.6 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin 0.53 44.0 2.91e-01 98.6% 68.4%
1005534 1.1.7.37 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FlgT_C 0.53 41.0 3.88e-01 84.9% 85.6%
3826439 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 44.0 3.36e-01 93.2% 72.8%
393055 11.1.1.229 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IRK_C 0.53 38.0 3.10e-01 80.8% 46.6%
3273223 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.52 37.0 3.13e-01 76.7% 91.3%
4867394 3820.1.1.1 a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_PI 0.52 41.0 3.74e-01 87.7% 82.8%
3810286 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.51 41.0 3.08e-01 90.4% 69.2%
3480782 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 36.0 2.99e-01 78.1% 93.8%
4545500 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.50 42.0 2.96e-01 93.2% 80.8%