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LC168164.1__BAV39381.1__BPT24_263__00259
Bact-VirLC168164.1__BAV39381.1__BPT24_263__00259
Identity
- Accession:
- LC168164 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 1880590
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
Domain cluster:
rep: OP795451.1__WAK44833.1__X__00011__D2-57
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10979.14 best | DUF2786 | 42.5 | 7.00e-11 | 75.9% | 95.0% |
D2
medium
residues 57-141_227-243
Domain cluster:
rep: MF185727.1__ASR86183.1__SEA_BOBSWAGET_78__00077__D64-160
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.79 | 54.0 | 6.11e-01 | 83.3% | 91.1% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 51.0 | 5.04e-01 | 83.3% | 67.6% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.70 | 46.0 | 5.28e-01 | 83.3% | 92.0% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 53.0 | 5.13e-01 | 82.4% | 84.2% |
| 3e05B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 40.0 | 3.19e-01 | 84.3% | 31.8% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.65 | 51.0 | 5.23e-01 | 82.4% | 91.9% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.63 | 50.0 | 5.07e-01 | 83.3% | 89.2% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 51.0 | 5.29e-01 | 91.2% | 92.6% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 38.0 | 3.13e-01 | 84.3% | 32.4% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 4.70e-01 | 82.4% | 76.3% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 4.71e-01 | 83.3% | 87.0% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.62 | 48.0 | 4.84e-01 | 82.4% | 87.6% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 4.77e-01 | 83.3% | 86.4% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 37.0 | 3.13e-01 | 70.6% | 34.5% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.64e-01 | 83.3% | 83.1% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 49.0 | 5.05e-01 | 87.3% | 91.9% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 47.0 | 3.58e-01 | 82.4% | 87.2% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 47.0 | 4.51e-01 | 83.3% | 85.3% |
| 3nwgA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.60 | 47.0 | 4.78e-01 | 93.1% | 85.1% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 47.0 | 4.83e-01 | 83.3% | 89.7% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 46.0 | 4.76e-01 | 82.4% | 89.4% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 52.0 | 4.86e-01 | 95.1% | 100.0% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 48.0 | 4.87e-01 | 87.3% | 91.2% |
| 1vqzA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 46.0 | 3.45e-01 | 83.3% | 55.0% |
| 1b3tA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.58 | 48.0 | 4.28e-01 | 89.2% | 71.4% |
| 1k1gA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 45.0 | 4.29e-01 | 83.3% | 83.6% |
| 3i4hX01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 4.19e-01 | 82.4% | 81.2% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 43.0 | 4.50e-01 | 82.4% | 86.2% |
| 1cqmA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.57 | 49.0 | 5.07e-01 | 93.1% | 99.0% |
| 2cxiA02 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.57 | 44.0 | 3.55e-01 | 82.4% | 78.3% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.57 | 43.0 | 3.18e-01 | 81.4% | 86.5% |
| 2j5aA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.57 | 49.0 | 4.89e-01 | 95.1% | 95.3% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 46.0 | 4.65e-01 | 86.3% | 91.1% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.56 | 48.0 | 4.50e-01 | 91.2% | 79.7% |
| 2raaA00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.56 | 44.0 | 3.65e-01 | 83.3% | 94.4% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.56 | 44.0 | 3.38e-01 | 83.3% | 89.9% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.55 | 47.0 | 4.28e-01 | 95.1% | 70.2% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.55 | 46.0 | 4.04e-01 | 92.2% | 83.6% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 4.50e-01 | 90.2% | 87.9% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 41.0 | 4.46e-01 | 81.4% | 100.0% |
| 7r5mA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 42.0 | 3.25e-01 | 83.3% | 91.5% |
| 3rhaA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 41.0 | 2.72e-01 | 83.3% | 65.8% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 28.0 | 2.99e-01 | 77.5% | 58.9% |
| 4c98A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.61e-01 | 81.4% | 83.2% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.10e-01 | 77.5% | 51.2% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.51 | 35.0 | 2.91e-01 | 70.6% | 86.5% |
| 3rpfA00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.51 | 39.0 | 3.55e-01 | 83.3% | 60.7% |
| 3fw9A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.51 | 46.0 | 3.78e-01 | 100.0% | 97.8% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3584264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.72 | 29.0 | 2.71e-01 | 83.3% | 29.6% |
| 3789602 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 29.0 | 2.70e-01 | 83.3% | 29.6% |
| 4629040 | 327.11.2.24 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_12 | 0.65 | 50.0 | 5.04e-01 | 83.3% | 79.0% |
| 4464039 | 327.11.2.24 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_12 | 0.65 | 50.0 | 4.78e-01 | 83.3% | 69.2% |
| 3708422 | 327.11.2.24 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_12 | 0.65 | 51.0 | 5.21e-01 | 83.3% | 85.0% |
| 5057906 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.65 | 51.0 | 5.08e-01 | 82.4% | 89.5% |
| 4936511 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.64 | 50.0 | 4.92e-01 | 82.4% | 87.3% |
| 3595318 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.64 | 50.0 | 5.22e-01 | 82.4% | 88.4% |
| 9346 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.63 | 38.0 | 3.11e-01 | 87.3% | 32.3% |
| 5041672 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.63 | 50.0 | 4.99e-01 | 82.4% | 88.3% |
| 3602951 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.63 | 49.0 | 4.94e-01 | 83.3% | 80.0% |
| 4032885 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 50.0 | 4.79e-01 | 83.3% | 87.0% |
| 4584621 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.63 | 50.0 | 5.09e-01 | 83.3% | 91.0% |
| 4943323 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.63 | 50.0 | 5.00e-01 | 83.3% | 87.5% |
| 4030190 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 53.0 | 4.84e-01 | 91.2% | 88.0% |
| 4614530 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.62 | 47.0 | 4.45e-01 | 83.3% | 67.5% |
| 3533575 | 327.11.2.24 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_12 | 0.62 | 48.0 | 4.76e-01 | 83.3% | 79.0% |
| 3953979 | 304.5.1.2 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF190 | 0.62 | 51.0 | 5.00e-01 | 88.2% | 94.5% |
| 4529537 | 327.11.2.11 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 | 0.61 | 48.0 | 4.27e-01 | 83.3% | 63.4% |
| 3417210 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.61 | 44.0 | 4.71e-01 | 82.4% | 85.6% |
| 5029187 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.60 | 45.0 | 4.92e-01 | 82.4% | 97.6% |
| 3077668 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.60 | 52.0 | 5.14e-01 | 97.1% | 97.2% |
| 4029363 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.60 | 46.0 | 3.93e-01 | 81.4% | 87.5% |
| 3617902 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.60 | 46.0 | 4.64e-01 | 83.3% | 83.0% |
| 3024932 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.59 | 46.0 | 4.56e-01 | 82.4% | 83.2% |
| 2093009 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.59 | 46.0 | 4.73e-01 | 83.3% | 87.5% |
| 3971017 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.59 | 50.0 | 4.86e-01 | 90.2% | 92.7% |
| 3471813 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.59 | 46.0 | 4.54e-01 | 83.3% | 78.9% |
| 3676562 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 41.0 | 3.22e-01 | 71.6% | 45.9% |
| 4226062 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.58 | 44.0 | 4.31e-01 | 82.4% | 75.7% |
| 5052711 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.58 | 45.0 | 4.08e-01 | 83.3% | 86.4% |
| 3961027 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 45.0 | 4.23e-01 | 83.3% | 79.2% |
| 5050142 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.58 | 45.0 | 4.06e-01 | 83.3% | 85.7% |
| 4027522 | 331.9.1.5 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf | 0.58 | 45.0 | 4.64e-01 | 83.3% | 87.8% |
| 4940944 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 38.0 | 3.56e-01 | 74.5% | 56.0% |
| 4989562 | 304.3.1.4 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D | 0.56 | 50.0 | 4.47e-01 | 100.0% | 95.2% |
| 4929832 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.56 | 47.0 | 4.72e-01 | 90.2% | 97.1% |
| 5049052 | 304.3.1.4 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D | 0.55 | 46.0 | 4.82e-01 | 91.2% | 100.0% |
| 3165343 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.55 | 46.0 | 4.37e-01 | 95.1% | 88.0% |
| 1915668 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.55 | 46.0 | 3.74e-01 | 92.2% | 66.7% |
| 5022277 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 39.0 | 3.58e-01 | 74.5% | 85.4% |
| 4217487 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.54 | 31.0 | 3.22e-01 | 83.3% | 58.9% |
| 3717787 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 41.0 | 2.81e-01 | 83.3% | 50.1% |
| 4319385 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.54 | 45.0 | 4.29e-01 | 95.1% | 92.0% |
| 4072538 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.54 | 44.0 | 4.24e-01 | 92.2% | 87.5% |
| 4487943 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.53 | 45.0 | 4.26e-01 | 96.1% | 86.2% |
| 3587666 | 330.1.1.11 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DUF1071 | 0.53 | 41.0 | 3.70e-01 | 81.4% | 97.8% |
| 4538250 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 39.0 | 3.52e-01 | 75.5% | 81.5% |
| 3693820 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.52 | 36.0 | 3.16e-01 | 85.3% | 47.4% |
| 4474382 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 42.0 | 3.94e-01 | 85.3% | 72.8% |
| 5000297 | 4010.1.1.0 ↗ | a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase | 0.52 | 38.0 | 2.64e-01 | 75.5% | 43.4% |
| 4637248 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.51 | 44.0 | 4.23e-01 | 97.1% | 93.3% |
| 3967497 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.50 | 38.0 | 2.57e-01 | 80.4% | 73.3% |
D3
medium
residues 142-226_244-270
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oh3A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.60 | 49.0 | 3.24e-01 | 90.2% | 46.9% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 41.0 | 4.25e-01 | 96.4% | 80.4% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 24.0 | 2.74e-01 | 80.4% | 51.8% |
| 3fhnA01 | 6.10.280.210 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A | 0.51 | 37.0 | 3.18e-01 | 75.9% | 66.3% |
| 7shlA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.50 | 36.0 | 3.52e-01 | 75.0% | 67.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3609719 | 604.3.1.14 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › Serinc | 0.53 | 43.0 | 3.55e-01 | 86.6% | 84.6% |
| 3694404 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 43.0 | 3.37e-01 | 100.0% | 43.9% |
| 4257280 | 5050.1.1.21 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FTR1 | 0.51 | 45.0 | 3.92e-01 | 100.0% | 63.4% |
| 54353 | 4266.1.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like | 0.50 | 35.0 | 3.39e-01 | 89.3% | 62.8% |
| 3692241 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 43.0 | 3.51e-01 | 97.3% | 57.8% |