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LC168164.1__BAX25562.1__BPT24_244__00240
Bact-VirLC168164.1__BAX25562.1__BPT24_244__00240
Identity
- Accession:
- LC168164 ↗
- Kingdom:
- phage
Quality
76.0
mean pLDDT
Taxonomy
TaxID: 1880590
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-115
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hrzB00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.81 | 75.0 | 6.93e-01 | 100.0% | 80.5% |
| 2l2nA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.72 | 36.0 | 4.23e-01 | 92.0% | 69.0% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.69 | 37.0 | 4.18e-01 | 78.0% | 68.9% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 37.0 | 4.18e-01 | 94.0% | 71.6% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 32.0 | 3.93e-01 | 100.0% | 71.9% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.66 | 48.0 | 5.14e-01 | 100.0% | 90.5% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.64 | 45.0 | 4.28e-01 | 100.0% | 61.7% |
| 2jobA00 | 3.30.160.320 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 37.0 | 3.75e-01 | 98.0% | 58.8% |
| 2gr7A00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.61 | 42.0 | 4.20e-01 | 100.0% | 69.3% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 44.0 | 3.19e-01 | 100.0% | 29.7% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 33.0 | 3.07e-01 | 100.0% | 47.6% |
| 1gr0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 38.0 | 4.04e-01 | 72.0% | 94.0% |
| 3ro6C01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 34.0 | 3.42e-01 | 74.0% | 61.3% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.59e-01 | 100.0% | 95.8% |
| 4w78F00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 39.0 | 3.60e-01 | 100.0% | 61.4% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 40.0 | 2.94e-01 | 83.0% | 100.0% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 43.0 | 3.83e-01 | 94.0% | 82.1% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.51 | 44.0 | 3.98e-01 | 100.0% | 67.8% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 40.0 | 3.23e-01 | 85.0% | 48.5% |
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 36.0 | 3.41e-01 | 100.0% | 62.9% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 42.0 | 3.02e-01 | 95.0% | 64.0% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.50 | 43.0 | 3.78e-01 | 94.0% | 63.6% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4103142 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.81 | 35.0 | 3.92e-01 | 100.0% | 52.5% |
| 4534466 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.80 | 34.0 | 3.49e-01 | 100.0% | 42.1% |
| 4330018 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.78 | 42.0 | 4.80e-01 | 81.0% | 70.7% |
| 4957572 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.74 | 68.0 | 6.11e-01 | 100.0% | 100.0% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.73 | 49.0 | 4.89e-01 | 100.0% | 65.7% |
| 3628462 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.70 | 31.0 | 4.07e-01 | 100.0% | 73.3% |
| 3451695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 39.0 | 4.07e-01 | 76.0% | 61.1% |
| 3711062 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 38.0 | 3.84e-01 | 93.0% | 57.0% |
| 4978072 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.66 | 45.0 | 4.37e-01 | 70.0% | 66.4% |
| 5021438 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 37.0 | 3.79e-01 | 91.0% | 56.0% |
| 3253837 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 43.0 | 2.96e-01 | 100.0% | 20.6% |
| 4312461 | 330.11.1.1 ↗ | a+b two layers › dsRBD-like › Anti-lipopolysaccharide factor (ALF) › Anti-lipopolysaccharide factor (ALF) › Anti-LPS-SCYG | 0.62 | 38.0 | 3.88e-01 | 98.0% | 62.2% |
| 3237754 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 39.0 | 4.07e-01 | 94.0% | 70.0% |
| 4029235 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.60 | 44.0 | 3.68e-01 | 100.0% | 42.1% |
| 4887510 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.59 | 33.0 | 3.60e-01 | 98.0% | 64.3% |
| 5071078 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.57 | 41.0 | 3.69e-01 | 73.0% | 84.2% |
| 3507047 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.55 | 41.0 | 4.14e-01 | 99.0% | 78.0% |
| 3582164 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 46.0 | 3.31e-01 | 92.0% | 65.3% |
| 3942438 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 47.0 | 4.54e-01 | 91.0% | 82.7% |
| 3170444 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.54 | 42.0 | 3.37e-01 | 92.0% | 41.0% |
| 3248029 | 223.7.1.1 ↗ | a+b three layers › Profilin-like › FLJ32549 C-terminal domain-like › FLJ32549 C-terminal domain-like › C12orf66_like | 0.54 | 34.0 | 3.03e-01 | 87.0% | 42.1% |
| 5064859 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.54 | 49.0 | 3.68e-01 | 100.0% | 80.8% |
| 4147467 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.53 | 42.0 | 3.84e-01 | 88.0% | 65.0% |
| 4299287 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.52 | 43.0 | 3.66e-01 | 92.0% | 97.7% |
| 3504767 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.52 | 31.0 | 3.61e-01 | 100.0% | 84.3% |
| 4237498 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 45.0 | 4.21e-01 | 98.0% | 76.0% |
| 5047435 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 39.0 | 3.54e-01 | 97.0% | 56.2% |
| 3579994 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 4.32e-01 | 98.0% | 89.2% |
| 4542063 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.52 | 44.0 | 4.15e-01 | 95.0% | 76.8% |
| 4951355 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 38.0 | 2.86e-01 | 89.0% | 29.0% |
| 5023892 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.51 | 45.0 | 4.17e-01 | 98.0% | 79.1% |
| 4116893 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.51 | 42.0 | 3.60e-01 | 91.0% | 99.4% |
| 5049952 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 37.0 | 3.70e-01 | 89.0% | 73.3% |
| 4679975 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 42.0 | 2.96e-01 | 94.0% | 40.5% |
| 5046054 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 38.0 | 3.60e-01 | 89.0% | 65.8% |
| 5044942 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 37.0 | 3.72e-01 | 89.0% | 75.2% |
| 4353676 | 223.1.1.41 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisK_sensor | 0.50 | 40.0 | 3.67e-01 | 88.0% | 64.4% |