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BBC20930.1

Arc-Vir

LC208019__BBC20930.1__X__00004

Identity

Accession:
LC208019 ↗
Protein ID:
BBC20930.1 ↗
Kingdom:
archaea

Quality

84.3 mean pLDDT

Taxonomy

TaxID: 1932713

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 36-118
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13365.13 best Trypsin_2 30.3 8.80e-07 74.7% 44.8%
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.92 81.0 7.78e-01 100.0% 82.6%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.92 76.0 7.57e-01 89.2% 83.5%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.90 79.0 7.74e-01 100.0% 86.5%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.90 80.0 5.80e-01 100.0% 38.4%
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.87 62.0 6.96e-01 89.2% 93.8%
5y2dA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 74.0 6.35e-01 100.0% 62.5%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 80.0 6.89e-01 100.0% 68.3%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 80.0 6.95e-01 100.0% 87.3%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.84 80.0 7.23e-01 100.0% 79.2%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 76.0 7.28e-01 98.8% 87.0%
4kkdB04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 75.0 6.47e-01 98.8% 87.9%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 75.0 7.39e-01 100.0% 92.0%
4ic6C01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 77.0 6.90e-01 100.0% 82.7%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.81 76.0 5.61e-01 100.0% 42.9%
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 72.0 6.67e-01 98.8% 88.5%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.78 59.0 4.10e-01 100.0% 25.7%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 64.0 6.69e-01 100.0% 96.1%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 70.0 6.77e-01 98.8% 95.7%
2aiqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 70.0 6.19e-01 100.0% 81.4%
1faxA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 67.0 6.09e-01 98.8% 86.9%
1ntpA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 66.0 6.08e-01 98.8% 86.4%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 51.0 3.20e-01 75.9% 15.2%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 53.0 5.57e-01 91.6% 91.9%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.68 61.0 5.61e-01 100.0% 88.1%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 62.0 6.01e-01 100.0% 98.9%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 49.0 4.66e-01 75.9% 96.9%
2zu2A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 61.0 5.81e-01 98.8% 84.7%
1xqbA01 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.67 47.0 4.36e-01 74.7% 75.2%
6hhuA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 46.0 4.78e-01 72.3% 100.0%
2ynaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 60.0 5.88e-01 98.8% 98.9%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 54.0 5.11e-01 90.4% 77.8%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.64 49.0 4.53e-01 83.1% 88.1%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 47.0 4.78e-01 78.3% 89.9%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 55.0 5.34e-01 98.8% 91.4%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 54.0 4.76e-01 100.0% 86.4%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 52.0 4.93e-01 97.6% 90.2%
6k2lA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 48.0 4.43e-01 89.2% 89.2%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.06e-01 86.7% 97.6%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.57 47.0 4.70e-01 92.8% 88.5%
1smrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.56 46.0 3.88e-01 96.4% 84.5%
1vw4X00 2.20.28.120 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 0.55 34.0 3.79e-01 88.0% 81.2%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.77e-01 80.7% 84.4%
3zugB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.54 43.0 3.71e-01 91.6% 62.7%
1f0lA03 2.60.40.700 Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain 0.53 46.0 3.85e-01 100.0% 86.4%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 44.0 3.95e-01 96.4% 74.6%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 4.14e-01 98.8% 91.7%
2moqA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 45.0 3.78e-01 97.6% 74.3%
3sz6A00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 46.0 4.10e-01 97.6% 90.5%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.52 35.0 3.83e-01 100.0% 93.7%
4ohvA03 2.40.30.330 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain 0.52 38.0 3.73e-01 96.4% 73.0%
1avwB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 38.0 3.07e-01 81.9% 92.4%
2huhA01 2.60.40.1600 Mainly Beta › Sandwich › Immunoglobulin-like › Smr-associated-like 0.51 42.0 3.65e-01 94.0% 72.1%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
140973 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.92 81.0 5.67e-01 100.0% 33.5%
3957702 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.90 83.0 6.81e-01 100.0% 59.3%
3950281 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.90 83.0 5.79e-01 100.0% 35.6%
3284172 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.90 74.0 5.37e-01 100.0% 35.1%
5072499 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.89 77.0 5.60e-01 100.0% 37.5%
3672433 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.89 67.0 4.45e-01 78.3% 26.6%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.89 79.0 5.91e-01 100.0% 42.8%
3280955 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.88 82.0 5.74e-01 100.0% 36.0%
4683578 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 83.0 5.83e-01 100.0% 47.1%
3284072 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 80.0 5.53e-01 100.0% 33.5%
4166426 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 82.0 5.55e-01 100.0% 44.9%
4329871 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 79.0 5.84e-01 100.0% 42.1%
4028467 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 81.0 5.45e-01 100.0% 33.5%
3448106 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 78.0 5.34e-01 100.0% 31.6%
3650249 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 81.0 5.60e-01 100.0% 37.6%
398505 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 81.0 5.70e-01 100.0% 37.7%
4324118 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.86 81.0 5.60e-01 100.0% 46.7%
134018 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 68.0 5.36e-01 100.0% 43.2%
3816110 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 80.0 5.65e-01 100.0% 42.2%
3532116 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 80.0 5.72e-01 100.0% 39.5%
3989070 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.85 79.0 5.67e-01 100.0% 49.1%
3429729 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 5.81e-01 100.0% 45.7%
3493511 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 79.0 5.54e-01 100.0% 37.0%
3464880 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 77.0 5.52e-01 100.0% 37.7%
3659932 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 79.0 5.43e-01 100.0% 44.0%
4169622 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 79.0 5.60e-01 100.0% 38.6%
3218403 1.1.5.73 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin, DUF316 0.83 77.0 5.15e-01 100.0% 45.4%
4600945 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.83 78.0 5.58e-01 100.0% 40.5%
3435448 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 78.0 5.45e-01 100.0% 37.8%
3843527 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 78.0 5.51e-01 100.0% 40.4%
3649347 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 78.0 6.30e-01 100.0% 71.0%
3739220 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 77.0 5.52e-01 100.0% 39.5%
4338510 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 75.0 5.37e-01 100.0% 37.2%
3428387 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.82 77.0 5.81e-01 100.0% 49.4%
3719164 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.81 70.0 5.22e-01 100.0% 40.0%
3417330 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.81 76.0 5.44e-01 100.0% 42.3%
3420315 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 76.0 5.54e-01 100.0% 44.5%
3464866 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 76.0 6.06e-01 100.0% 65.3%
3731870 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.80 75.0 4.86e-01 100.0% 33.8%
4028981 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 75.0 5.37e-01 100.0% 40.9%
3420143 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 75.0 5.90e-01 100.0% 56.2%
4532479 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.22e-01 100.0% 40.0%
3281996 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.80 75.0 5.42e-01 100.0% 40.0%
3454710 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.80 74.0 5.33e-01 100.0% 38.2%
3452728 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.80 75.0 5.46e-01 100.0% 41.0%
3611892 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 69.0 5.17e-01 100.0% 40.5%
3580932 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.06e-01 100.0% 35.8%
5057020 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 73.0 6.27e-01 100.0% 81.6%
3437290 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 73.0 5.26e-01 100.0% 44.2%
3443107 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 70.0 4.95e-01 100.0% 35.6%
2060704 1.1.5.13 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.77 62.0 4.27e-01 100.0% 27.6%
4011912 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 70.0 4.86e-01 100.0% 36.4%
3203392 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 65.0 4.61e-01 100.0% 40.0%
3710460 1.1.7.45 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.71 55.0 5.02e-01 83.1% 87.2%
3710311 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 55.0 4.72e-01 83.1% 89.2%
4162532 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 52.0 5.45e-01 78.3% 85.3%
3967745 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 52.0 5.43e-01 77.1% 86.7%
3970225 1.1.13.68 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 0.70 58.0 5.64e-01 90.4% 86.7%
4947671 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 50.0 5.11e-01 75.9% 93.8%
3418960 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 60.0 4.57e-01 98.8% 90.0%
3288253 1.1.13.55 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 0.68 58.0 5.72e-01 95.2% 98.9%
3943844 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.68 59.0 5.60e-01 97.6% 86.0%
3956293 1.1.5.75 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 0.67 58.0 5.51e-01 96.4% 87.0%
4472606 1.1.13.55 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 0.67 59.0 5.57e-01 97.6% 87.0%
3976283 1.1.13.32 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF1480 0.66 54.0 5.60e-01 89.2% 98.7%
3947980 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.64 57.0 5.40e-01 100.0% 91.0%
3205875 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 55.0 4.64e-01 95.2% 84.4%
3228180 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.61 51.0 4.45e-01 90.4% 99.2%
3698630 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.59 44.0 4.11e-01 80.7% 66.7%
3251681 11.1.1.802 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.59 46.0 4.55e-01 86.7% 96.7%
3599398 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.58 45.0 4.27e-01 100.0% 70.0%
3583243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.18e-01 94.0% 68.6%
4237254 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.56 41.0 4.09e-01 91.6% 75.3%
2563286 11.1.1.861 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NEAT, DUF2283 0.53 44.0 3.74e-01 94.0% 98.0%
149675 11.1.1.72 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NEAT 0.52 46.0 4.05e-01 98.8% 89.4%
4442582 11.1.1.72 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NEAT 0.52 47.0 3.98e-01 100.0% 83.7%
D2 medium residues 119-225
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13365.13 best Trypsin_2 32.0 2.80e-07 73.8% 46.9%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.89 69.0 7.13e-01 100.0% 85.1%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.88 75.0 7.28e-01 100.0% 81.7%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 67.0 6.83e-01 91.6% 83.8%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 65.0 6.66e-01 100.0% 87.1%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 61.0 6.11e-01 89.7% 76.9%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 73.0 7.43e-01 100.0% 97.2%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 75.0 7.51e-01 100.0% 99.1%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 71.0 7.23e-01 100.0% 99.0%
4b6eB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 61.0 4.84e-01 100.0% 44.1%
2hlcA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 67.0 6.35e-01 93.5% 88.9%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 64.0 6.60e-01 100.0% 94.1%
4lk4A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 71.0 6.67e-01 100.0% 88.8%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 64.0 6.24e-01 91.6% 88.9%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 35.0 4.69e-01 88.8% 86.4%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 47.0 5.22e-01 86.0% 85.9%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.70 43.0 4.65e-01 93.5% 71.7%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 63.0 6.44e-01 100.0% 100.0%
5eokA05 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 65.0 4.93e-01 100.0% 46.5%
2v3mA00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.67 42.0 4.52e-01 95.3% 72.3%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 53.0 4.72e-01 87.9% 79.9%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 52.0 4.58e-01 86.9% 77.4%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.64 50.0 4.95e-01 88.8% 79.3%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 52.0 4.40e-01 87.9% 69.7%
3pftA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 52.0 4.59e-01 87.9% 78.2%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 52.0 4.37e-01 87.9% 68.2%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 52.0 4.28e-01 87.9% 67.7%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 52.0 4.61e-01 87.9% 76.5%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 51.0 4.42e-01 86.9% 76.2%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 51.0 4.48e-01 87.9% 75.2%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 52.0 5.02e-01 88.8% 95.0%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 4.50e-01 87.9% 78.9%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 50.0 4.41e-01 87.9% 78.9%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 50.0 4.46e-01 87.9% 78.8%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 49.0 4.28e-01 87.9% 78.3%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 49.0 4.73e-01 93.5% 77.9%
2eqnA01 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.59 40.0 4.33e-01 92.5% 83.9%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.58 41.0 4.63e-01 81.3% 100.0%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 34.0 3.74e-01 93.5% 79.1%
2yjlA00 2.60.40.2990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 4.12e-01 88.8% 83.3%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 34.0 3.65e-01 84.1% 75.5%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.52 44.0 4.47e-01 94.4% 99.1%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.51 34.0 3.89e-01 93.5% 93.4%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.50 37.0 3.16e-01 78.5% 70.2%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.89 75.0 5.70e-01 100.0% 43.3%
None 0.89 75.0 5.77e-01 100.0% 44.1%
None 0.89 75.0 5.74e-01 100.0% 43.3%
None 0.88 75.0 5.73e-01 100.0% 43.7%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.88 76.0 6.15e-01 100.0% 52.8%
3962616 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 81.0 6.76e-01 100.0% 61.8%
4387060 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.86 75.0 5.76e-01 100.0% 45.1%
None 0.86 75.0 5.80e-01 100.0% 46.2%
3601993 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.86 75.0 5.93e-01 100.0% 49.7%
3280223 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.86 69.0 5.52e-01 100.0% 46.2%
4247805 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.86 74.0 5.75e-01 100.0% 46.0%
5023947 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.85 67.0 5.59e-01 100.0% 51.2%
3719164 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.85 74.0 5.93e-01 100.0% 51.1%
3611892 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 75.0 5.99e-01 100.0% 51.6%
4031177 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 73.0 5.67e-01 100.0% 45.3%
3452728 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 78.0 6.07e-01 100.0% 50.7%
3415399 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 76.0 5.89e-01 100.0% 47.9%
3960372 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.83 64.0 7.16e-01 96.3% 100.0%
3867774 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 77.0 4.77e-01 100.0% 20.4%
3449628 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 69.0 6.71e-01 100.0% 80.9%
3545090 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 77.0 5.87e-01 100.0% 47.7%
3772106 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 77.0 5.82e-01 100.0% 46.7%
3650249 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 76.0 5.57e-01 100.0% 42.0%
4974463 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.82 63.0 5.40e-01 100.0% 52.8%
3783834 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 77.0 5.66e-01 100.0% 43.9%
4329871 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 69.0 5.56e-01 100.0% 50.0%
4822902 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 68.0 5.82e-01 99.1% 58.9%
3244773 1.1.5.49 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.80 67.0 4.94e-01 99.1% 36.5%
3969197 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 76.0 5.50e-01 100.0% 41.1%
3518839 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 5.34e-01 100.0% 49.5%
4969578 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.79 45.0 5.33e-01 81.3% 81.1%
5040907 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.79 69.0 5.22e-01 100.0% 42.6%
3950458 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 67.0 5.47e-01 100.0% 52.2%
4173923 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 75.0 5.63e-01 100.0% 48.5%
5051302 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 70.0 5.39e-01 100.0% 44.9%
4011912 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 74.0 5.48e-01 100.0% 46.0%
3637221 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 74.0 5.36e-01 100.0% 43.0%
3246847 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 63.0 5.09e-01 100.0% 46.7%
5016520 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 73.0 5.53e-01 100.0% 48.9%
3220497 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.78 64.0 4.97e-01 100.0% 42.3%
5039728 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 72.0 5.45e-01 100.0% 50.4%
4987864 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.77 43.0 5.06e-01 82.2% 78.7%
4614564 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 66.0 5.24e-01 99.1% 49.2%
3492991 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.77 71.0 6.57e-01 100.0% 88.1%
3485102 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 71.0 6.36e-01 100.0% 81.4%
3399711 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 71.0 5.39e-01 100.0% 50.6%
4352127 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 71.0 5.26e-01 100.0% 46.2%
3407383 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 70.0 5.17e-01 100.0% 45.6%
3694033 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.75 66.0 5.95e-01 100.0% 70.7%
3674829 1.1.13.61 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gar1 0.75 47.0 5.80e-01 84.1% 98.6%
257 1.1.5.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.74 64.0 4.98e-01 100.0% 44.7%
3599795 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.73 68.0 4.90e-01 100.0% 48.9%
3403363 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 68.0 4.99e-01 100.0% 44.5%
170199 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 66.0 5.16e-01 100.0% 48.6%
3597690 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 36.0 4.40e-01 90.7% 75.7%
3409540 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 64.0 4.81e-01 100.0% 50.6%
3932484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 38.0 4.75e-01 89.7% 92.2%
3978877 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 40.0 4.29e-01 81.3% 68.9%
3714390 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.66 46.0 4.33e-01 94.4% 60.8%
3246086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 37.0 3.91e-01 90.7% 62.1%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 34.0 4.38e-01 88.8% 90.0%
3388880 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.63 43.0 4.28e-01 92.5% 67.3%
3232791 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.61 40.0 3.80e-01 92.5% 54.6%
3625263 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 37.0 3.85e-01 87.9% 65.0%
3787137 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 37.0 4.08e-01 87.9% 78.8%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 40.0 3.08e-01 90.7% 32.9%
3979986 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.57 35.0 4.08e-01 90.7% 88.0%
5030535 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.54 33.0 3.91e-01 92.5% 88.0%
3243188 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 33.0 3.94e-01 89.7% 89.3%
5065570 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.53 34.0 3.73e-01 92.5% 81.2%