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BBC20937.1

Arc-Vir

LC208019__BBC20937.1__X__00011

Identity

Accession:
LC208019 ↗
Protein ID:
BBC20937.1 ↗
Kingdom:
archaea

Quality

85.3 mean pLDDT

Taxonomy

TaxID: 1932713

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-106
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.68 43.0 4.74e-01 92.0% 77.1%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.67 47.0 5.42e-01 93.0% 100.0%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 46.0 5.05e-01 70.0% 98.8%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 45.0 4.36e-01 72.0% 84.4%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 44.0 4.34e-01 72.0% 86.8%
2jifA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.63 41.0 3.55e-01 74.0% 43.5%
4kn7D01 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.60 50.0 4.51e-01 89.0% 80.5%
2ddhA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.60 41.0 3.77e-01 72.0% 54.5%
5uh5D02 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.59 49.0 4.41e-01 89.0% 66.7%
3bqkA02 1.20.1310.20 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain 0.59 46.0 3.97e-01 82.0% 71.0%
3dzaA01 1.20.120.1940 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain 0.59 48.0 4.54e-01 93.0% 73.5%
2l6hA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.58 48.0 4.17e-01 95.0% 57.8%
2jx0A00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.58 48.0 4.40e-01 96.0% 67.9%
1auwA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.58 49.0 3.85e-01 96.0% 63.2%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 29.0 3.18e-01 86.0% 55.7%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.57 39.0 3.77e-01 72.0% 87.8%
8a9xA01 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.56 34.0 3.93e-01 91.0% 82.7%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 50.0 4.62e-01 99.0% 80.5%
6l3tA01 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.55 45.0 3.58e-01 87.0% 59.3%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.55 39.0 3.93e-01 73.0% 96.0%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.54 50.0 4.74e-01 100.0% 88.9%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 45.0 4.65e-01 96.0% 95.7%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.54 42.0 4.39e-01 91.0% 90.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.55e-01 77.0% 88.0%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.54 47.0 4.81e-01 96.0% 100.0%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 47.0 3.91e-01 97.0% 75.4%
1ga3A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 38.0 3.72e-01 74.0% 94.7%
3x29A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.54 46.0 3.86e-01 93.0% 71.7%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.23e-01 95.0% 50.4%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 32.0 2.93e-01 91.0% 45.0%
1s2xA00 1.20.190.30 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › CAG pathogenicity island protein, CagZ 0.53 46.0 3.84e-01 96.0% 90.6%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.53 44.0 4.23e-01 91.0% 80.7%
3f0cA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 46.0 4.14e-01 99.0% 100.0%
6t0bc02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.53 47.0 3.82e-01 99.0% 55.5%
5fiiB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 27.0 2.97e-01 86.0% 57.7%
3mfnB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 43.0 4.02e-01 92.0% 78.6%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.50 44.0 4.34e-01 99.0% 100.0%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3686609 6026.1.1.0 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain 0.77 52.0 5.48e-01 94.0% 77.8%
4255929 1197.1.1.1 alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf 0.65 58.0 4.38e-01 94.0% 61.8%
5060418 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.65 46.0 4.25e-01 72.0% 87.5%
4978893 3755.3.1.632 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Prefoldin 0.65 45.0 3.96e-01 72.0% 82.9%
3390092 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.64 57.0 5.23e-01 96.0% 76.9%
3506312 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.64 44.0 3.89e-01 70.0% 66.7%
4623683 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.64 46.0 3.64e-01 90.0% 37.5%
3229643 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 46.0 4.30e-01 75.0% 90.0%
5079691 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 44.0 3.94e-01 72.0% 85.9%
3690513 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 44.0 3.94e-01 72.0% 58.6%
4889682 11.2.1.20 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › FerB 0.62 54.0 4.64e-01 93.0% 62.7%
3691694 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 44.0 4.07e-01 73.0% 70.4%
5000789 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 43.0 4.30e-01 72.0% 90.5%
3590491 604.39.1.33 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ThrE 0.62 54.0 4.78e-01 91.0% 75.6%
5047910 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.62 54.0 3.41e-01 95.0% 71.2%
3990696 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 42.0 3.27e-01 70.0% 45.0%
3973023 3281.1.1.0 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related 0.61 54.0 3.30e-01 95.0% 25.9%
4250601 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.61 46.0 3.98e-01 93.0% 48.8%
None 0.61 53.0 3.59e-01 90.0% 37.4%
3917315 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.61 53.0 4.12e-01 95.0% 86.5%
5029669 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 42.0 3.93e-01 71.0% 75.0%
4257864 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.61 55.0 3.48e-01 98.0% 73.1%
3886005 601.2.1.0 alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes 0.60 52.0 4.96e-01 93.0% 80.9%
3190691 616.1.1.49 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › SF1-HH 0.60 50.0 4.77e-01 89.0% 81.7%
4441043 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.60 44.0 3.81e-01 87.0% 48.8%
3765856 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.60 52.0 4.06e-01 95.0% 73.8%
4966410 3281.1.1.0 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related 0.60 51.0 3.16e-01 95.0% 62.4%
3919679 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.59 52.0 3.91e-01 97.0% 68.8%
5003283 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.59 53.0 3.26e-01 99.0% 60.2%
3561564 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.59 52.0 3.91e-01 97.0% 79.6%
3204126 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.58 50.0 5.05e-01 92.0% 98.0%
5041948 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.58 52.0 3.26e-01 99.0% 65.5%
4409033 3281.1.1.2 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N 0.57 51.0 3.18e-01 99.0% 60.2%
5077393 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.57 51.0 3.27e-01 99.0% 74.4%
4407831 3281.1.1.2 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N 0.57 49.0 3.06e-01 99.0% 59.1%
3699252 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.57 51.0 4.07e-01 97.0% 81.6%
3930773 633.23.1.17 alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA 0.56 48.0 3.57e-01 95.0% 97.8%
4648174 5050.1.1.73 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1, MFS_1_like 0.56 51.0 3.28e-01 99.0% 91.1%
3358654 5054.1.1.2 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.56 49.0 3.45e-01 100.0% 67.2%
4575479 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.56 48.0 3.12e-01 95.0% 24.9%
3593366 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 49.0 3.99e-01 96.0% 79.5%
3973017 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.55 42.0 3.88e-01 100.0% 61.5%
3733226 3883.1.1.1 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.55 46.0 3.85e-01 91.0% 78.9%
3905385 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.55 46.0 3.76e-01 91.0% 63.7%
4267553 1076.1.1.1 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.55 51.0 3.98e-01 100.0% 99.5%
3418785 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.55 44.0 3.55e-01 89.0% 86.8%
3901573 604.12.1.97 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PMP22_Claudin 0.55 45.0 4.44e-01 89.0% 88.2%
3673117 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.55 45.0 3.90e-01 87.0% 65.3%
4931005 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 22.0 2.82e-01 70.0% 61.8%
3904532 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.55 39.0 2.89e-01 75.0% 53.1%
4961958 5001.1.1.292 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM 0.55 49.0 3.76e-01 99.0% 78.2%
3620201 3382.1.1.1 alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.54 48.0 3.40e-01 100.0% 66.3%
5066236 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 37.0 3.31e-01 72.0% 64.8%
3845971 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.54 46.0 3.62e-01 98.0% 86.7%
4557416 3937.1.1.1 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Connexin 0.53 46.0 3.47e-01 97.0% 89.8%
3504151 3382.1.1.1 alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.53 48.0 3.34e-01 100.0% 64.8%
5054049 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 37.0 3.56e-01 72.0% 81.7%
3778928 5050.1.1.22 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like 0.53 45.0 3.01e-01 99.0% 69.3%
3477544 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 46.0 3.74e-01 97.0% 59.5%
3236544 3382.1.1.1 alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.53 47.0 3.40e-01 100.0% 68.5%
3252459 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.53 45.0 3.70e-01 97.0% 72.3%
4026204 192.10.1.0 alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.53 46.0 4.57e-01 94.0% 88.6%
3252200 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.52 46.0 3.94e-01 97.0% 61.9%
3806737 5057.1.1.0 alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.52 46.0 4.15e-01 100.0% 85.0%
3788676 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.52 44.0 4.00e-01 92.0% 72.6%
3923193 3382.1.1.1 alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.52 46.0 3.25e-01 99.0% 68.2%
3229069 633.23.1.5 alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.52 45.0 3.59e-01 97.0% 81.4%
3938146 3382.1.1.1 alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.51 44.0 3.15e-01 99.0% 62.0%
3698882 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.51 44.0 3.59e-01 97.0% 71.7%
3940115 604.29.1.1 alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N 0.51 45.0 4.33e-01 98.0% 92.2%
5018572 304.48.1.72 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_N 0.51 42.0 3.47e-01 89.0% 70.0%
5068190 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.51 23.0 2.73e-01 84.0% 60.0%
4132207 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.51 37.0 3.28e-01 77.0% 86.9%