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BBC20938.1

Arc-Vir

LC208019__BBC20938.1__X__00012

Identity

Accession:
LC208019 ↗
Protein ID:
BBC20938.1 ↗
Kingdom:
archaea

Quality

73.7 mean pLDDT

Taxonomy

TaxID: 1932713

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-74
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 52.0 5.34e-01 83.1% 98.5%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 47.0 4.90e-01 74.6% 95.2%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 46.0 3.00e-01 74.6% 19.2%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.65 50.0 3.47e-01 83.1% 85.0%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 53.0 3.37e-01 93.0% 64.2%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 47.0 3.37e-01 78.9% 87.3%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 42.0 3.87e-01 70.4% 60.0%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.63 50.0 3.45e-01 91.5% 51.5%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 51.0 3.41e-01 94.4% 78.1%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 44.0 3.17e-01 76.1% 94.7%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.61 46.0 3.42e-01 84.5% 90.2%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 41.0 3.64e-01 71.8% 53.7%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.60 48.0 3.23e-01 90.1% 38.0%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 4.87e-01 87.3% 94.4%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 52.0 3.41e-01 100.0% 85.0%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.59 47.0 3.05e-01 88.7% 42.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 4.67e-01 77.5% 98.3%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 3.64e-01 77.5% 89.2%
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.59 48.0 4.42e-01 94.4% 100.0%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.58 43.0 3.21e-01 80.3% 41.8%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 48.0 3.27e-01 100.0% 89.7%
3v39A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 44.0 3.18e-01 87.3% 89.5%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 46.0 3.00e-01 87.3% 39.2%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.57 44.0 3.10e-01 84.5% 37.9%
1dm9A00 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.57 41.0 3.59e-01 74.6% 78.8%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 41.0 3.51e-01 78.9% 74.4%
2rqxA00 2.40.50.650 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 41.0 3.92e-01 77.5% 98.8%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 3.90e-01 74.6% 77.8%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.55 43.0 4.51e-01 98.6% 93.7%
2ozoA04 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 40.0 3.74e-01 77.5% 95.6%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 3.84e-01 98.6% 73.0%
2nryD01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 39.0 3.64e-01 76.1% 95.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.74e-01 71.8% 75.8%
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 45.0 3.92e-01 93.0% 81.4%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.54 42.0 4.23e-01 87.3% 98.6%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 3.50e-01 100.0% 49.2%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 43.0 3.68e-01 90.1% 68.6%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 46.0 4.06e-01 100.0% 78.7%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.53 43.0 3.32e-01 94.4% 65.5%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.60e-01 77.5% 65.1%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.68e-01 71.8% 86.4%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.98e-01 90.1% 79.8%
4bhrA00 3.30.1300.70 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.52 42.0 4.10e-01 91.5% 95.1%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.41e-01 95.8% 47.1%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.51 38.0 3.53e-01 81.7% 62.8%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.56e-01 98.6% 63.0%
2k6pA00 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.50 36.0 3.48e-01 78.9% 98.8%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.73 59.0 3.81e-01 88.7% 61.5%
3802207 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.69 56.0 3.71e-01 91.5% 43.8%
3290541 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.69 49.0 5.09e-01 74.6% 92.3%
3206625 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.68 43.0 5.03e-01 76.1% 100.0%
4031476 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 54.0 4.81e-01 87.3% 79.6%
3955467 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.67 44.0 4.52e-01 76.1% 70.0%
3592067 243.4.1.0 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.66 52.0 3.92e-01 85.9% 86.1%
3827251 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.66 54.0 3.47e-01 90.1% 40.0%
5033517 243.1.1.23 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3887 0.66 48.0 4.31e-01 77.5% 100.0%
3853654 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.64 52.0 3.40e-01 88.7% 55.8%
3993494 5.1.5.42 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RMC1_N 0.64 50.0 3.40e-01 87.3% 37.5%
4972214 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 53.0 3.18e-01 91.5% 14.0%
3828964 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.62 49.0 2.99e-01 88.7% 43.9%
3892544 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.62 54.0 3.59e-01 100.0% 88.9%
5052205 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.61 54.0 3.12e-01 97.2% 63.5%
3338677 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.61 51.0 3.31e-01 91.5% 92.6%
3453930 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 51.0 3.40e-01 91.5% 77.5%
5013425 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 44.0 3.09e-01 78.9% 90.0%
3510918 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 45.0 3.70e-01 80.3% 60.7%
3744121 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.60 47.0 3.03e-01 88.7% 30.4%
3879944 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.60 49.0 3.40e-01 93.0% 61.5%
3180579 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.60 48.0 3.12e-01 90.1% 92.9%
4938029 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.60 44.0 3.99e-01 78.9% 70.4%
3517323 3131.1.1.2 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN 0.59 49.0 4.26e-01 93.0% 89.1%
3695617 5.1.3.137 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.59 46.0 3.01e-01 88.7% 92.2%
3993569 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 46.0 3.05e-01 88.7% 92.7%
3605468 219.1.1.97 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.58 47.0 3.47e-01 95.8% 74.7%
3321190 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 49.0 3.24e-01 98.6% 82.4%
3812208 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 48.0 2.95e-01 93.0% 63.7%
3870987 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.58 49.0 4.56e-01 100.0% 95.8%
3544943 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.58 49.0 4.47e-01 100.0% 92.0%
4937915 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.58 42.0 3.85e-01 78.9% 63.6%
3591097 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 46.0 3.24e-01 93.0% 81.5%
3587060 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 39.0 3.94e-01 73.2% 93.3%
3853974 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.57 49.0 4.43e-01 100.0% 91.0%
4022986 5.1.3.116 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.57 46.0 2.96e-01 90.1% 93.9%
3251559 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 35.0 4.04e-01 71.8% 90.0%
4059465 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.56 38.0 3.89e-01 76.1% 73.5%
3960152 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.56 45.0 3.73e-01 91.5% 85.9%
3622425 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.55 37.0 3.16e-01 70.4% 46.7%
3960453 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 47.0 3.81e-01 98.6% 71.0%
3400395 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.55 45.0 3.92e-01 93.0% 87.8%
3822963 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 44.0 3.71e-01 91.5% 59.2%
3933294 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.55 39.0 3.49e-01 76.1% 82.9%
3949576 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.54 46.0 3.63e-01 98.6% 64.4%
3503123 3338.2.1.0 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.54 44.0 3.88e-01 98.6% 80.0%
3571668 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.54 45.0 3.15e-01 100.0% 70.7%
3088529 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 43.0 3.52e-01 93.0% 55.2%
4026958 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 38.0 4.18e-01 94.4% 100.0%
3791839 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.53 43.0 4.20e-01 95.8% 83.7%
4112177 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.52 35.0 3.63e-01 74.6% 75.4%
3578085 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.52 45.0 4.01e-01 100.0% 79.0%
3866038 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.52 36.0 3.45e-01 97.2% 61.2%
3622139 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 39.0 3.66e-01 100.0% 65.6%
3194962 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 38.0 2.54e-01 80.3% 86.4%
3586203 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 38.0 3.96e-01 100.0% 90.8%
3624184 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.50 43.0 3.73e-01 98.6% 67.8%
2126408 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.50 38.0 3.66e-01 94.4% 72.8%