←Back to structures

LC210520.1__BAX02597.1__X__00001

Bact-Vir

LC210520.1__BAX02597.1__X__00001

Identity

Accession:
LC210520 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Taxonomy

Loebvirae› Hofneiviricota› Faserviricetes› Tubulavirales› Paulinoviridae› Thomixvirus› Thermus_phage_phiOH16

TaxID: 1968340

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-105
PDB
Domain cluster: rep: MN908685.1__QIG57856.1__SEA_PAULODIABOLI_138__00122__D3-109
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01548.24 best DEDD_Tnp_IS110 54.1 2.30e-14 98.1% 49.0%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nuwA02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.78 59.0 4.64e-01 78.6% 75.6%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.77 45.0 5.46e-01 70.9% 90.9%
3t69A02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.76 56.0 4.35e-01 78.6% 70.4%
5aj3K00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.71 50.0 4.52e-01 71.8% 73.5%
3by5A00 3.30.420.180 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain 0.66 58.0 5.49e-01 97.1% 79.7%
3mwpB02 3.30.420.410 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Arenaviral nucleoprotein, C-terminal domain 0.65 56.0 4.75e-01 96.1% 89.6%
5i7wA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 43.0 4.22e-01 98.1% 62.3%
7bvaA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 55.0 4.29e-01 97.1% 88.9%
3bigA02 3.40.190.90 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.62 48.0 4.09e-01 91.3% 51.5%
5a0tB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 47.0 3.45e-01 82.5% 83.6%
3stuB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 52.0 3.95e-01 99.0% 98.5%
3tp9A02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.60 47.0 4.60e-01 85.4% 78.2%
3c3mA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 44.0 4.17e-01 79.6% 88.6%
3b8iC00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.58 44.0 3.24e-01 80.6% 54.0%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 52.0 3.74e-01 100.0% 88.3%
3kzvA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 51.0 3.93e-01 100.0% 92.4%
6ilsA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 52.0 3.71e-01 100.0% 88.1%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 52.0 3.72e-01 100.0% 87.9%
1y7lA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 41.0 4.18e-01 74.8% 87.4%
1tdjA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 40.0 4.26e-01 72.8% 93.5%
5im4F00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.57 51.0 4.76e-01 100.0% 83.2%
1x7oA01 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.57 38.0 3.89e-01 95.1% 70.7%
2nwqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 50.0 4.00e-01 100.0% 95.4%
1z7mE02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 33.0 3.58e-01 89.3% 69.0%
3bedA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.56 50.0 4.66e-01 100.0% 85.4%
3imkA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 48.0 4.22e-01 95.1% 94.9%
1xmxA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 39.0 3.54e-01 100.0% 51.0%
4qdiA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.56 44.0 4.00e-01 85.4% 96.5%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 49.0 4.16e-01 100.0% 68.0%
1booA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 3.51e-01 98.1% 62.4%
4pagA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 48.0 4.43e-01 98.1% 84.6%
2qv0A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 46.0 4.43e-01 99.0% 99.2%
3e0xA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 46.0 3.60e-01 100.0% 90.6%
4navA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 46.0 3.86e-01 98.1% 83.4%
4bfaA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 47.0 3.53e-01 97.1% 79.5%
3ecsD02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.52 48.0 3.83e-01 100.0% 84.2%
2x5jQ01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 45.0 3.90e-01 100.0% 99.4%
2o4cA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 3.51e-01 85.4% 64.5%
1qyiA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 45.0 3.81e-01 100.0% 99.5%
5bt9D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 44.0 3.35e-01 96.1% 49.6%
3sqlA02 3.40.50.10870 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycosyl hydrolase family 3 0.51 43.0 3.83e-01 97.1% 83.0%
7u35A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 37.0 3.88e-01 92.2% 87.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4108829 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.96 93.0 8.73e-01 100.0% 95.0%
3963766 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.96 93.0 8.68e-01 100.0% 93.3%
3954516 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.91 87.0 8.17e-01 100.0% 94.2%
3988559 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.91 87.0 8.20e-01 100.0% 97.5%
3589909 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.91 86.0 8.11e-01 100.0% 94.2%
4219785 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.90 86.0 8.11e-01 100.0% 95.0%
4179220 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.89 85.0 7.89e-01 100.0% 92.0%
3982042 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.89 84.0 7.70e-01 100.0% 86.2%
3956789 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.89 84.0 7.28e-01 100.0% 75.3%
5063663 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.84 80.0 8.01e-01 100.0% 99.0%
3943749 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.78 70.0 5.14e-01 96.1% 99.6%
4640482 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.73 66.0 5.87e-01 99.0% 75.2%
3270529 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.72 66.0 5.57e-01 100.0% 74.7%
5063089 2484.1.1.39 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.72 61.0 4.59e-01 90.3% 99.6%
4577571 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.72 65.0 5.57e-01 99.0% 74.4%
5056095 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.72 65.0 5.21e-01 100.0% 82.4%
4509605 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.71 64.0 5.80e-01 100.0% 77.1%
4552223 2007.1.19.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › SAT 0.71 49.0 3.47e-01 71.8% 96.1%
4048529 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.69 62.0 5.33e-01 99.0% 74.5%
4936273 4262.1.1.1 ↗ a/b three-layered sandwiches › CobE/CbiG C-terminal domain-like › CobE/CbiG C-terminal domain-like › CobE/CbiG C-terminal domain-like › CbiG_C 0.68 59.0 5.63e-01 96.1% 80.5%
10972 4262.1.1.1 ↗ a/b three-layered sandwiches › CobE/CbiG C-terminal domain-like › CobE/CbiG C-terminal domain-like › CobE/CbiG C-terminal domain-like › CbiG_C 0.66 58.0 5.49e-01 97.1% 79.7%
3988256 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 50.0 4.94e-01 84.5% 88.2%
4682851 2484.1.1.16 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII 0.63 51.0 3.94e-01 86.4% 68.2%
3355851 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.62 49.0 3.52e-01 85.4% 59.3%
4965115 7528.1.1.3 ↗ a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_III 0.61 39.0 3.82e-01 92.2% 56.5%
4309091 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.61 47.0 3.97e-01 83.5% 85.0%
3270892 2002.1.1.56 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.60 45.0 3.14e-01 79.6% 51.1%
3969580 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 53.0 4.24e-01 100.0% 91.9%
4012740 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.59 53.0 3.76e-01 100.0% 69.8%
3878541 2007.9.1.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › SEFIR 0.59 45.0 3.73e-01 81.6% 92.1%
3979985 2008.1.1.16 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.59 43.0 3.88e-01 81.6% 55.2%
3825825 2006.1.4.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN 0.58 44.0 3.90e-01 99.0% 54.2%
4993625 2006.1.4.50 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 0.58 46.0 4.05e-01 97.1% 55.8%
None — 0.58 43.0 3.35e-01 79.6% 51.9%
3607243 2007.2.5.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.57 50.0 4.50e-01 97.1% 87.1%
5035603 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.56 44.0 3.41e-01 85.4% 50.0%
3380965 2006.1.1.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.56 50.0 3.91e-01 97.1% 86.0%
3526594 2007.9.1.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › SEFIR 0.56 43.0 3.71e-01 83.5% 92.2%
3445225 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.56 48.0 3.61e-01 96.1% 79.6%
5067832 2008.1.1.16 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.56 36.0 3.74e-01 75.7% 69.5%
149492 2485.1.1.4 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.56 45.0 4.08e-01 96.1% 63.8%
None — 0.55 46.0 3.47e-01 92.2% 72.3%
5044019 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 47.0 3.54e-01 99.0% 38.0%
5035850 2006.1.5.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Arginase 0.55 43.0 3.23e-01 86.4% 87.4%
3937689 2496.1.1.2 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.55 46.0 4.07e-01 92.2% 96.0%
None — 0.54 48.0 4.05e-01 99.0% 82.7%
2050701 2007.1.14.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.54 49.0 4.27e-01 99.0% 76.3%
4464748 2004.1.1.105 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase 0.54 42.0 4.06e-01 83.5% 87.5%
3964359 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.54 48.0 4.07e-01 100.0% 83.7%
4013467 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.54 48.0 3.47e-01 100.0% 92.4%
3793679 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.53 44.0 3.67e-01 90.3% 52.0%
4945492 2003.6.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like 0.53 46.0 3.31e-01 100.0% 36.0%
3461013 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.52 45.0 3.61e-01 96.1% 71.7%
4114949 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.51 40.0 3.47e-01 85.4% 91.8%
3962549 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 44.0 3.95e-01 99.0% 97.3%
D2 high residues 116-194
PDB
Domain cluster: representative
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.88 64.0 7.05e-01 84.8% 93.8%
4mhlA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.88 63.0 4.87e-01 74.7% 100.0%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.86 68.0 6.31e-01 83.5% 71.4%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.86 63.0 6.94e-01 75.9% 96.8%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.86 69.0 6.65e-01 84.8% 85.1%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.85 66.0 7.27e-01 81.0% 100.0%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.85 66.0 6.90e-01 82.3% 91.7%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.85 69.0 6.95e-01 86.1% 89.9%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.85 68.0 6.89e-01 84.8% 88.3%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 63.0 6.62e-01 79.7% 100.0%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.83 69.0 4.43e-01 87.3% 28.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.83 68.0 6.01e-01 87.3% 61.6%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.83 57.0 5.88e-01 70.9% 100.0%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.82 64.0 5.86e-01 87.3% 64.1%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.82 63.0 5.64e-01 82.3% 61.5%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.82 59.0 6.65e-01 87.3% 100.0%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.81 65.0 6.05e-01 84.8% 94.8%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.81 62.0 6.06e-01 81.0% 81.2%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.80 71.0 6.62e-01 98.7% 78.4%
3hhcC00 1.20.1250.60 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda 0.80 52.0 4.16e-01 72.2% 35.1%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.79 66.0 6.19e-01 88.6% 78.7%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.79 62.0 6.36e-01 83.5% 89.5%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.79 64.0 5.20e-01 87.3% 49.7%
1w9rA00 1.20.58.440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A 0.79 64.0 5.56e-01 87.3% 59.7%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 60.0 6.00e-01 81.0% 86.3%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.79 62.0 4.93e-01 86.1% 73.3%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.79 61.0 5.63e-01 92.4% 64.7%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.78 63.0 5.30e-01 87.3% 55.6%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 67.0 6.65e-01 92.4% 97.5%
4yjwA00 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.78 63.0 5.04e-01 87.3% 52.3%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.78 58.0 5.97e-01 78.5% 89.2%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.78 63.0 5.35e-01 100.0% 53.9%
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.77 69.0 4.47e-01 97.5% 84.9%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 56.0 5.84e-01 86.1% 82.4%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 56.0 6.14e-01 87.3% 95.3%
3jcuZ00 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.76 56.0 6.12e-01 84.8% 100.0%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.76 62.0 6.44e-01 92.4% 95.9%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.76 62.0 5.36e-01 87.3% 58.0%
2fupA00 1.20.58.300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like 0.76 64.0 5.45e-01 94.9% 57.5%
2gl2B00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 62.0 5.60e-01 89.9% 65.1%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 54.0 5.64e-01 75.9% 89.0%
1kmiZ02 1.10.287.500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.75 59.0 4.94e-01 84.8% 50.0%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.75 52.0 5.81e-01 77.2% 98.3%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 58.0 5.83e-01 92.4% 83.3%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.74 61.0 5.62e-01 89.9% 69.6%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.74 59.0 4.52e-01 87.3% 47.5%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 45.0 4.70e-01 91.1% 67.1%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.73 57.0 5.76e-01 84.8% 94.8%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 64.0 5.77e-01 94.9% 74.3%
3jrtA00 1.20.120.1060 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.72 65.0 5.10e-01 100.0% 84.9%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 65.0 5.88e-01 100.0% 90.7%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.72 62.0 5.51e-01 98.7% 72.0%
1hx8A02 1.20.58.150 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › ANTH domain 0.71 54.0 4.79e-01 93.7% 55.6%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.71 53.0 5.50e-01 79.7% 89.2%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 50.0 5.61e-01 73.4% 100.0%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.70 61.0 5.53e-01 94.9% 70.8%
1rfyB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.70 55.0 5.35e-01 89.9% 76.1%
1hciA03 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 59.0 5.14e-01 92.4% 69.2%
2cmrA00 1.20.58.1860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 63.0 4.72e-01 100.0% 66.7%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 63.0 5.76e-01 98.7% 92.2%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 55.0 5.73e-01 97.5% 95.8%
3t98B00 6.10.140.1350 Special › Helix non-globular › Helix Hairpins › 0.70 55.0 5.40e-01 87.3% 91.9%
3teqB00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 63.0 5.77e-01 100.0% 96.0%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 58.0 5.04e-01 96.2% 74.2%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 61.0 5.58e-01 100.0% 83.7%
4lunU00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 52.0 3.50e-01 94.9% 21.2%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.67 53.0 5.09e-01 88.6% 75.6%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.65 56.0 4.65e-01 96.2% 72.7%
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.65 52.0 5.27e-01 87.3% 94.7%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.63 47.0 4.68e-01 87.3% 78.0%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 55.0 4.78e-01 100.0% 64.2%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 52.0 4.13e-01 92.4% 52.5%
1quuA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 54.0 4.71e-01 100.0% 65.9%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.61 55.0 4.79e-01 100.0% 70.3%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 53.0 4.93e-01 100.0% 81.2%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 49.0 4.42e-01 100.0% 77.5%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.57 44.0 4.01e-01 88.6% 60.9%
2x6hA03 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.57 40.0 3.00e-01 74.7% 29.0%
2vf8B02 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.52 44.0 3.58e-01 96.2% 74.2%
4aciA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 42.0 3.29e-01 88.6% 84.7%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4475138 606.1.1.16 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Transposase_20 0.89 80.0 5.82e-01 100.0% 38.0%
3880166 192.2.1.14 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › CDK5RAP3 0.87 69.0 4.77e-01 84.8% 28.3%
3574626 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.87 70.0 5.64e-01 84.8% 55.7%
3638005 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.87 64.0 6.59e-01 77.2% 100.0%
4975739 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 68.0 4.27e-01 83.5% 21.8%
5057328 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.84 71.0 4.36e-01 89.9% 44.5%
3764851 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.84 67.0 6.39e-01 84.8% 78.9%
3468090 5086.1.1.87 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.83 69.0 5.96e-01 87.3% 62.6%
4660205 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.83 66.0 5.47e-01 84.8% 56.3%
3608075 603.1.1.218 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Flagellar_rod 0.83 68.0 5.19e-01 87.3% 41.8%
4401282 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.83 68.0 5.91e-01 87.3% 63.5%
4260979 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 66.0 4.45e-01 84.8% 26.0%
3493358 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.82 65.0 6.22e-01 86.1% 73.3%
3462288 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.81 67.0 6.40e-01 88.6% 90.0%
3589400 192.5.1.4 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF1140 0.80 71.0 6.52e-01 94.9% 93.0%
3930829 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.80 63.0 6.47e-01 87.3% 88.0%
4028451 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.80 75.0 6.30e-01 100.0% 80.0%
149872 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.80 63.0 6.38e-01 84.8% 86.1%
3848917 3939.1.1.0 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.80 64.0 6.26e-01 84.8% 97.6%
5056100 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.80 64.0 6.55e-01 84.8% 100.0%
4025445 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.80 64.0 5.94e-01 86.1% 72.0%
3167271 192.8.1.385 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med11 0.80 68.0 6.82e-01 92.4% 100.0%
3259118 3560.1.1.7 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Med10 0.80 57.0 4.90e-01 93.7% 49.2%
4038778 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.79 64.0 5.64e-01 87.3% 63.5%
3368307 3291.1.1.119 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NET2A 0.79 63.0 5.85e-01 86.1% 68.0%
2482296 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.79 61.0 5.48e-01 92.4% 60.0%
4051951 605.2.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.79 64.0 6.12e-01 87.3% 81.1%
5006936 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.78 56.0 6.02e-01 74.7% 98.5%
3741747 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.78 64.0 4.27e-01 87.3% 24.2%
3517916 2004.1.1.480 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.77 62.0 3.87e-01 87.3% 16.5%
3207548 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.77 60.0 4.98e-01 84.8% 82.1%
3598836 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.77 70.0 6.25e-01 100.0% 87.3%
3804036 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 69.0 6.06e-01 100.0% 87.8%
3965792 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.76 62.0 4.13e-01 86.1% 66.9%
3701245 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.76 67.0 5.99e-01 97.5% 84.5%
2576339 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.76 61.0 5.33e-01 87.3% 65.8%
4021462 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 68.0 4.04e-01 100.0% 45.5%
3592972 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 61.0 4.49e-01 86.1% 35.4%
3253427 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.75 53.0 5.18e-01 87.3% 67.0%
3286299 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.75 59.0 5.26e-01 84.8% 61.8%
3693258 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.74 68.0 6.02e-01 100.0% 90.9%
4372535 3683.1.1.0 ↗ 0.74 66.0 4.98e-01 100.0% 96.8%
4944522 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.74 65.0 4.61e-01 100.0% 41.2%
4935077 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.73 57.0 5.84e-01 86.1% 88.0%
3788311 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.73 64.0 5.72e-01 100.0% 80.0%
3711300 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.72 64.0 5.18e-01 100.0% 57.4%
3796213 3567.1.1.83 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › SOAR 0.72 66.0 6.16e-01 100.0% 87.4%
3736709 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.72 57.0 4.17e-01 87.3% 33.6%
4039014 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.71 57.0 5.13e-01 88.6% 65.5%
4116112 192.8.1.353 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 0.71 55.0 5.53e-01 100.0% 85.0%
4336724 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.70 57.0 5.17e-01 89.9% 64.5%
3716649 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.68 58.0 3.95e-01 94.9% 32.1%
3282651 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.67 57.0 3.46e-01 96.2% 37.3%
3408094 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 58.0 4.91e-01 100.0% 75.6%
1248638 603.3.1.1 ↗ alpha bundles › STAT-like › CAPPD, an extracellular domain of amyloid beta A4 protein › CAPPD, an extracellular domain of amyloid beta A4 protein › APP_E2 0.66 57.0 5.21e-01 100.0% 84.5%
4951108 141.1.1.3 ↗ alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA 0.64 57.0 3.97e-01 100.0% 95.8%
1505957 604.1.1.3 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MAP65_ASE1 0.63 57.0 4.87e-01 100.0% 65.6%
3991608 109.4.1.102 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL 0.61 51.0 3.32e-01 94.9% 20.5%
D3 high residues 210-302
PDB
Domain cluster: rep: AB161975.2__BAD16804.1__X__00020__D183-298
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02371.23 best Transposase_20 49.4 6.90e-13 67.7% 69.0%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ragA02 1.10.10.430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily 0.65 33.0 3.79e-01 100.0% 64.7%
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.64 33.0 3.65e-01 100.0% 60.5%
2h21A02 3.90.1420.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain 0.62 35.0 2.87e-01 100.0% 30.9%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.54 34.0 4.13e-01 81.7% 98.4%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.53 34.0 3.85e-01 100.0% 85.9%
3k9vA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 46.0 2.95e-01 97.8% 55.4%
2g47A04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.53 37.0 2.82e-01 74.2% 53.8%
2xzmG00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.52 41.0 3.26e-01 84.9% 66.1%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.51 32.0 3.85e-01 98.9% 92.2%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.50 34.0 3.58e-01 93.5% 77.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5020250 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.90 86.0 7.12e-01 100.0% 63.1%
3589919 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.90 85.0 7.22e-01 100.0% 71.4%
3588662 102.1.2.14 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › Transposase_20 0.90 84.0 7.20e-01 100.0% 71.4%
4961799 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.89 84.0 7.48e-01 100.0% 76.0%
3517643 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.88 83.0 7.54e-01 100.0% 78.3%
3959204 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.87 81.0 7.33e-01 98.9% 80.0%
5039799 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.87 82.0 7.00e-01 100.0% 69.3%
5046816 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.87 82.0 7.44e-01 100.0% 78.3%
4048384 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.87 81.0 7.03e-01 100.0% 69.6%
3588074 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.85 79.0 7.06e-01 100.0% 77.6%
3956050 102.1.4.2 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 0.83 77.0 6.63e-01 100.0% 67.1%
1066185 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.58 33.0 4.14e-01 98.9% 96.3%
3206518 632.22.1.62 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › ATG17_like 0.56 35.0 2.71e-01 100.0% 28.6%
3655782 101.1.2.598 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD 0.51 33.0 2.28e-01 100.0% 19.7%
3272247 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.50 30.0 2.72e-01 75.3% 37.2%