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LC371242.1__BBC78318.1__X__00270
Bact-VirLC371242.1__BBC78318.1__X__00270
Identity
- Accession:
- LC371242 ↗
- Kingdom:
- phage
Quality
58.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Kagamiyamavirus›
Escherichia_phage_EcS1
TaxID: 2083276
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-49
Domain cluster:
rep: KY593455.1__ARB06042.1__fHeYen901_269__00268__D10-48
D2
medium
residues 114-311
D3
medium
residues 543-620
D4
medium
residues 633-687
D5
medium
residues 890-976
Domain cluster:
rep: MW073017.1__QPB08539.1__X__00060__D1038-1127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13884.12 best | Peptidase_S74 | 22.2 | 1.90e-04 | 43.7% | 46.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6et0A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.65 | 36.0 | 2.99e-01 | 86.2% | 31.1% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 51.0 | 4.40e-01 | 100.0% | 68.4% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 51.0 | 4.25e-01 | 100.0% | 62.8% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.50 | 34.0 | 2.52e-01 | 70.1% | 62.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.66 | 43.0 | 3.78e-01 | 100.0% | 48.3% |
| 4988512 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.59 | 51.0 | 4.12e-01 | 97.7% | 98.9% |
| None | — | 0.58 | 47.0 | 3.24e-01 | 89.7% | 81.9% | |
| 3705453 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.56 | 43.0 | 3.17e-01 | 83.9% | 75.6% |
| 4927759 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.54 | 44.0 | 3.55e-01 | 86.2% | 88.7% |
| 3268551 | 5054.1.1.71 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PTPLA | 0.54 | 47.0 | 3.48e-01 | 95.4% | 65.1% |
| 3619358 | 5001.1.1.111 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw | 0.53 | 46.0 | 3.12e-01 | 100.0% | 41.7% |
| 3254436 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.52 | 21.0 | 2.61e-01 | 74.7% | 58.2% |
| 4931277 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.52 | 42.0 | 3.44e-01 | 86.2% | 90.3% |
| 2772512 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 32.0 | 2.64e-01 | 85.1% | 36.2% |