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LC483177.1__BBK09277.1__X__00163

Bact-Vir

LC483177.1__BBK09277.1__X__00163

Identity

Accession:
LC483177 ↗
Kingdom:
phage

Quality

86.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_05F01

TaxID: 2583037

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-76
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.67 51.0 4.79e-01 81.1% 90.9%
2odaA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.62 43.0 3.13e-01 71.6% 65.6%
5xdcB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.50 39.0 3.37e-01 82.4% 85.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3196820 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 54.0 3.42e-01 78.4% 15.8%
3269634 192.17.1.0 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like 0.74 49.0 5.38e-01 71.6% 83.3%
4988487 547.1.1.1 ↗ alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.70 47.0 4.64e-01 70.3% 64.6%
3942637 148.1.3.232 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF3418 0.65 52.0 3.59e-01 85.1% 42.5%
3593968 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.59 39.0 3.64e-01 73.0% 55.6%