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LC483177.1__BBK09394.1__X__00280

Bact-Vir

LC483177.1__BBK09394.1__X__00280

Identity

Accession:
LC483177 ↗
Kingdom:
phage

Quality

88.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_05F01

TaxID: 2583037

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-92
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.66 39.0 4.73e-01 93.4% 96.4%
2r01A02 2.20.180.10 Mainly Beta › Single Sheet › putative fmn-dependent nitroreductase like fold › putative fmn-dependent nitroreductase like domains 0.65 24.0 3.51e-01 93.4% 73.8%
4jtmA00 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.61 36.0 3.83e-01 91.2% 66.7%
1yhpA02 2.60.40.1720 Mainly Beta › Sandwich › Immunoglobulin-like › Calcium-dependent cell adhesion molecule-1 0.55 47.0 4.32e-01 94.5% 95.0%
3u5eU00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.54 45.0 4.42e-01 92.3% 95.0%
1g3pA02 3.90.450.1 Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 0.53 36.0 3.55e-01 71.4% 81.7%
1nkiA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 40.0 3.57e-01 81.3% 73.1%
2xtlA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.53 45.0 4.40e-01 93.4% 90.9%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.52 43.0 4.27e-01 91.2% 96.9%
2qdfA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 40.0 4.17e-01 92.3% 94.0%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 37.0 3.06e-01 78.0% 96.7%
6j09A02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 40.0 4.23e-01 91.2% 98.7%
6vu9A02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 38.0 2.76e-01 80.2% 80.7%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.51 41.0 3.15e-01 87.9% 47.4%
5uayA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 41.0 4.30e-01 93.4% 100.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4459724 221.9.1.1 ↗ a+b two layers › beta-Grasp › N-terminal domain of bypass of forespore C, BofC › N-terminal domain of bypass of forespore C, BofC › BOFC_N 0.66 40.0 4.67e-01 95.6% 86.2%
1070142 3070.1.1.11 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.61 37.0 3.90e-01 92.3% 67.9%
3966854 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.59 34.0 3.64e-01 91.2% 65.4%
2588602 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.58 34.0 3.53e-01 91.2% 62.2%
4570617 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.54 39.0 4.26e-01 93.4% 97.1%
4061383 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.54 37.0 4.16e-01 93.4% 95.7%
4078764 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.53 37.0 3.95e-01 93.4% 83.7%
4423151 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.53 37.0 3.92e-01 93.4% 83.7%
4437117 314.1.1.9 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.53 40.0 2.73e-01 81.3% 80.6%
4522693 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 37.0 3.80e-01 93.4% 78.8%
4132904 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 37.0 4.14e-01 94.5% 97.1%
4042900 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 36.0 3.64e-01 93.4% 70.5%
4186960 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 37.0 4.07e-01 93.4% 97.1%
4636192 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 36.0 4.00e-01 93.4% 95.7%
4032219 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 36.0 3.62e-01 93.4% 70.5%
4663871 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.52 36.0 3.64e-01 93.4% 71.6%
4079294 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.51 36.0 3.65e-01 93.4% 72.3%
4268191 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.51 36.0 3.58e-01 93.4% 70.5%
4284934 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.50 35.0 3.54e-01 93.4% 70.5%
4243983 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.50 35.0 3.48e-01 93.4% 68.0%
4301600 3121.1.1.2 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_1 0.50 35.0 3.59e-01 92.3% 77.6%