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LC487410.1__BBL19241.1__KIT04_072__00072
Bact-VirLC487410.1__BBL19241.1__KIT04_072__00072
Identity
- Accession:
- LC487410 ↗
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Taxonomy
TaxID: 2508207
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-68
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1isiA01 | 1.20.82.10 | Mainly Alpha › Up-down Bundle › ADP Ribosyl Cyclase; Chain A, domain 1 › ADP Ribosyl Cyclase; Chain A, domain 1 | 0.55 | 43.0 | 3.58e-01 | 86.4% | 91.8% |
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 42.0 | 3.34e-01 | 95.5% | 71.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048820 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.64 | 52.0 | 3.53e-01 | 92.4% | 23.5% |
| 4995195 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.62 | 48.0 | 3.39e-01 | 92.4% | 24.7% |
| 4992350 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.61 | 49.0 | 3.38e-01 | 92.4% | 24.6% |
| 4935099 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.60 | 53.0 | 3.81e-01 | 100.0% | 65.5% |
| 4965039 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.60 | 48.0 | 3.29e-01 | 92.4% | 24.1% |
| 5071361 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.60 | 47.0 | 4.51e-01 | 86.4% | 78.7% |
| 4985470 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.57 | 43.0 | 4.23e-01 | 89.4% | 78.6% |
| 5076000 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.57 | 44.0 | 4.39e-01 | 87.9% | 82.9% |
| 5078120 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.56 | 41.0 | 4.09e-01 | 83.3% | 77.1% |
| 4931700 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.56 | 44.0 | 4.35e-01 | 87.9% | 82.9% |
| 4976851 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.56 | 42.0 | 4.20e-01 | 87.9% | 78.6% |
| 5034808 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.56 | 44.0 | 4.32e-01 | 87.9% | 82.9% |
| 4992927 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.55 | 42.0 | 4.19e-01 | 86.4% | 81.4% |
| 4955004 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.55 | 40.0 | 4.11e-01 | 80.3% | 86.7% |
| 4988064 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.54 | 42.0 | 4.20e-01 | 87.9% | 82.9% |
| 3478915 | 574.1.1.0 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) | 0.54 | 35.0 | 3.63e-01 | 71.2% | 73.3% |
| 4874450 | 182.1.2.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › Fe-S cluster domain of DNA primase › PF26466 | 0.53 | 44.0 | 3.02e-01 | 92.4% | 90.5% |
| 3709217 | 574.1.1.1 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp | 0.52 | 36.0 | 3.62e-01 | 75.8% | 68.6% |
| 3343191 | 574.1.1.1 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp | 0.51 | 37.0 | 3.53e-01 | 78.8% | 66.3% |