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LC519601.1__BBU72731.1__X__00085
Bact-VirLC519601.1__BBU72731.1__X__00085
Identity
- Accession:
- LC519601 ↗
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Grimontviridae›
Privateervirus›
Cronobacter_phage_vB_CsaP_009
TaxID: 2699738
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-111
Domain cluster:
representative
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 48.0 | 4.01e-01 | 75.5% | 93.2% |
| 4mtmA01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 46.0 | 4.64e-01 | 73.4% | 85.4% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.65 | 46.0 | 4.13e-01 | 73.4% | 58.5% |
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 45.0 | 4.21e-01 | 73.4% | 81.8% |
| 1jv2A04 | 2.60.40.1530 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 | 0.64 | 49.0 | 3.98e-01 | 83.0% | 85.6% |
| 1bvp102 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 46.0 | 4.14e-01 | 75.5% | 95.5% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.64 | 42.0 | 4.75e-01 | 80.9% | 98.4% |
| 2opwA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.63 | 49.0 | 3.57e-01 | 85.1% | 54.5% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.63 | 45.0 | 4.26e-01 | 76.6% | 89.7% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.62 | 43.0 | 4.12e-01 | 72.3% | 71.8% |
| 1ahsA00 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 43.0 | 3.89e-01 | 71.3% | 100.0% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 44.0 | 4.04e-01 | 74.5% | 64.8% |
| 3aclA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 44.0 | 4.05e-01 | 73.4% | 66.9% |
| 3bu7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 46.0 | 3.16e-01 | 81.9% | 71.3% |
| 1opoA02 | 2.60.40.1780 | Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein | 0.61 | 43.0 | 4.21e-01 | 74.5% | 69.9% |
| 4fgmA01 | 2.60.40.3650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 52.0 | 4.33e-01 | 97.9% | 93.6% |
| 2vveA01 | 2.60.120.770 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 42.0 | 4.29e-01 | 73.4% | 91.4% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 45.0 | 4.17e-01 | 79.8% | 71.4% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 43.0 | 4.15e-01 | 74.5% | 75.2% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 4.30e-01 | 79.8% | 85.8% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.60 | 43.0 | 4.22e-01 | 76.6% | 74.3% |
| 4lejA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 43.0 | 3.59e-01 | 76.6% | 54.4% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 50.0 | 3.95e-01 | 96.8% | 87.4% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 41.0 | 3.96e-01 | 72.3% | 71.8% |
| 1o4tA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 41.0 | 3.87e-01 | 72.3% | 68.7% |
| 3cewA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 41.0 | 3.97e-01 | 73.4% | 72.7% |
| 4b29A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 44.0 | 3.53e-01 | 80.9% | 84.6% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 41.0 | 3.97e-01 | 73.4% | 73.8% |
| 4nhxA02 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.58 | 43.0 | 3.25e-01 | 77.7% | 53.6% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.58 | 46.0 | 3.99e-01 | 86.2% | 83.4% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 41.0 | 3.79e-01 | 74.5% | 77.8% |
| 3ciaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.58 | 49.0 | 4.04e-01 | 96.8% | 91.3% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 43.0 | 3.53e-01 | 79.8% | 50.6% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.57 | 39.0 | 3.70e-01 | 71.3% | 78.3% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 40.0 | 3.43e-01 | 73.4% | 53.5% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 49.0 | 3.98e-01 | 96.8% | 88.6% |
| 7me5A01 | 2.60.40.2170 | Mainly Beta › Sandwich › Immunoglobulin-like › Wnt, WIF domain | 0.57 | 40.0 | 3.63e-01 | 74.5% | 68.7% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 49.0 | 4.19e-01 | 97.9% | 88.6% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 4.07e-01 | 74.5% | 87.2% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 3.95e-01 | 77.7% | 73.0% |
| 1z5hA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.56 | 48.0 | 4.04e-01 | 96.8% | 89.4% |
| 7o0eA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 39.0 | 4.08e-01 | 74.5% | 80.7% |
| 2wcoA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 38.0 | 3.56e-01 | 71.3% | 56.5% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 43.0 | 4.18e-01 | 84.0% | 98.1% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 42.0 | 3.99e-01 | 79.8% | 76.4% |
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 40.0 | 3.83e-01 | 75.5% | 70.0% |
| 3b34A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.56 | 47.0 | 3.90e-01 | 96.8% | 87.8% |
| 3fw6A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 39.0 | 3.67e-01 | 73.4% | 63.2% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.56 | 49.0 | 3.73e-01 | 100.0% | 48.9% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.55 | 39.0 | 3.77e-01 | 74.5% | 82.1% |
| 5cadA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 40.0 | 3.11e-01 | 74.5% | 45.1% |
| 2nqcA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.04e-01 | 77.7% | 83.5% |
| 4ie5A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.55 | 41.0 | 3.10e-01 | 83.0% | 54.9% |
| 7zvmA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 39.0 | 3.88e-01 | 76.6% | 80.4% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 37.0 | 3.64e-01 | 70.2% | 66.0% |
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 40.0 | 3.53e-01 | 78.7% | 68.7% |
| 4ph8A00 | 2.60.40.2910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.60e-01 | 83.0% | 83.3% |
| 5jqyA02 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.54 | 40.0 | 3.27e-01 | 80.9% | 90.8% |
| 5wy8B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.73e-01 | 73.4% | 83.7% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 37.0 | 3.44e-01 | 73.4% | 75.4% |
| 2vqaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 38.0 | 3.07e-01 | 73.4% | 48.0% |
| 4b9gA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.98e-01 | 96.8% | 87.7% |
| 5dzxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 37.0 | 3.61e-01 | 72.3% | 85.6% |
| 4frwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 3.61e-01 | 71.3% | 85.4% |
| 3ibmB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 33.0 | 2.96e-01 | 74.5% | 41.1% |
| 1jmmA02 | 2.60.530.10 | Mainly Beta › Sandwich › Major cell-surface adhesin PAc › Major cell-surface adhesin PAc | 0.52 | 40.0 | 2.83e-01 | 85.1% | 95.0% |
| 4depC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.65e-01 | 74.5% | 89.2% |
| 2atfA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.59e-01 | 96.8% | 85.5% |
| 6iaaA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.80e-01 | 73.4% | 96.3% |
| 3eqeA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 3.06e-01 | 73.4% | 43.6% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.79e-01 | 96.8% | 68.3% |
| 3lb9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.50 | 41.0 | 3.41e-01 | 93.6% | 73.1% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4073646 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.70 | 48.0 | 4.54e-01 | 70.2% | 92.7% |
| 3338010 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.69 | 48.0 | 5.25e-01 | 71.3% | 96.0% |
| 3588730 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.69 | 50.0 | 5.03e-01 | 75.5% | 83.2% |
| 5048055 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 49.0 | 4.64e-01 | 77.7% | 98.2% |
| 2512673 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 48.0 | 4.37e-01 | 76.6% | 92.1% |
| 3582449 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.65 | 45.0 | 4.95e-01 | 71.3% | 95.9% |
| 4972680 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 46.0 | 4.59e-01 | 73.4% | 100.0% |
| 5042048 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 49.0 | 3.80e-01 | 79.8% | 39.2% |
| 3479505 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.64 | 45.0 | 3.85e-01 | 73.4% | 81.3% |
| 4630707 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 44.0 | 4.24e-01 | 72.3% | 67.3% |
| 5044775 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 44.0 | 4.25e-01 | 72.3% | 97.1% |
| 3481360 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.62 | 44.0 | 3.77e-01 | 74.5% | 54.2% |
| 8624 | 929.1.1.1 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin › Resistin | 0.62 | 41.0 | 4.26e-01 | 81.9% | 71.9% |
| 3870891 | 929.1.1.1 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin › Resistin | 0.62 | 39.0 | 4.13e-01 | 71.3% | 70.6% |
| 4021361 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 42.0 | 4.33e-01 | 71.3% | 73.0% |
| 2491354 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.62 | 44.0 | 4.41e-01 | 74.5% | 84.4% |
| 4291120 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.62 | 46.0 | 4.14e-01 | 79.8% | 95.6% |
| 1876188 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.62 | 44.0 | 4.04e-01 | 74.5% | 64.8% |
| 3590148 | 11.1.5.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GBS104-like_Ig | 0.62 | 46.0 | 3.69e-01 | 80.9% | 60.5% |
| 5056154 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.61 | 53.0 | 4.49e-01 | 95.7% | 81.3% |
| 3973758 | 10.12.1.98 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer | 0.61 | 44.0 | 4.15e-01 | 75.5% | 71.1% |
| 5012735 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.61 | 44.0 | 2.81e-01 | 75.5% | 17.6% |
| 4357938 | 10.12.1.154 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer, ManC_GMP_beta-helix | 0.61 | 44.0 | 3.57e-01 | 75.5% | 46.3% |
| 3878175 | 11.1.1.322 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITGAX-like_Ig_3 | 0.61 | 46.0 | 3.69e-01 | 80.9% | 82.1% |
| 3404684 | 10.12.1.84 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › VKGC_lumenal_dom | 0.60 | 45.0 | 3.49e-01 | 78.7% | 42.4% |
| 4174964 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.60 | 43.0 | 3.50e-01 | 75.5% | 44.3% |
| 4934579 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.60 | 52.0 | 4.58e-01 | 96.8% | 82.9% |
| 3547860 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.60 | 44.0 | 4.02e-01 | 78.7% | 98.5% |
| 3744243 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 45.0 | 4.30e-01 | 80.9% | 78.2% |
| 4929284 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.60 | 51.0 | 4.44e-01 | 95.7% | 82.0% |
| 3797565 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.59 | 51.0 | 3.95e-01 | 96.8% | 86.8% |
| 4988640 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.59 | 42.0 | 4.07e-01 | 75.5% | 74.5% |
| 5076974 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.59 | 42.0 | 4.37e-01 | 76.6% | 78.9% |
| 3528111 | 10.21.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 | 0.59 | 44.0 | 4.06e-01 | 79.8% | 99.2% |
| 4567075 | 10.12.1.84 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › VKGC_lumenal_dom | 0.59 | 44.0 | 3.18e-01 | 79.8% | 31.2% |
| 4026939 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 42.0 | 3.96e-01 | 76.6% | 74.8% |
| 4604481 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.58 | 41.0 | 3.10e-01 | 74.5% | 50.0% |
| 3609473 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 45.0 | 3.84e-01 | 84.0% | 92.3% |
| 1823836 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 39.0 | 3.74e-01 | 70.2% | 65.5% |
| 4977180 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 41.0 | 4.05e-01 | 75.5% | 78.0% |
| 5042004 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.59e-01 | 98.9% | 88.8% |
| 5029142 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.98e-01 | 80.9% | 97.5% |
| 3723454 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 42.0 | 3.55e-01 | 78.7% | 56.9% |
| 4173823 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.56 | 48.0 | 3.96e-01 | 96.8% | 90.3% |
| 4404708 | 929.1.1.0 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin | 0.56 | 39.0 | 4.19e-01 | 72.3% | 100.0% |
| 1769854 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.56 | 39.0 | 3.63e-01 | 73.4% | 64.5% |
| 5083331 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 3.69e-01 | 74.5% | 89.2% |
| 3934677 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.52e-01 | 76.6% | 60.0% |
| 5043945 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 38.0 | 3.71e-01 | 71.3% | 90.5% |
| 3973946 | 10.20.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N | 0.55 | 41.0 | 3.91e-01 | 80.9% | 98.3% |
| None | — | 0.54 | 46.0 | 2.78e-01 | 95.7% | 25.9% | |
| 4614136 | 12.1.1.44 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C | 0.54 | 43.0 | 4.27e-01 | 93.6% | 81.0% |
| 5068792 | 11.1.1.249 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 | 0.54 | 37.0 | 3.62e-01 | 71.3% | 78.1% |
| 4968497 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 38.0 | 3.61e-01 | 73.4% | 88.7% |
| 3730494 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.54 | 46.0 | 4.21e-01 | 97.9% | 86.2% |
| 3743265 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 47.0 | 4.28e-01 | 100.0% | 85.4% |
| 3183459 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.53 | 36.0 | 3.33e-01 | 70.2% | 87.0% |
| 4957821 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.54e-01 | 73.4% | 87.8% |
| 3497224 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.51e-01 | 80.9% | 78.5% |
| 5070547 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.72e-01 | 73.4% | 91.1% |
| 3187961 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.51 | 45.0 | 4.12e-01 | 97.9% | 88.0% |
| 2771922 | 12.2.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C | 0.51 | 36.0 | 3.32e-01 | 72.3% | 56.7% |
| 3897394 | 11.1.5.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sec23_BS | 0.50 | 43.0 | 3.53e-01 | 96.8% | 63.3% |
D2
medium
residues 147-206
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 51.0 | 3.10e-01 | 78.3% | 14.3% |
| 2bhvB01 | 2.40.128.260 | Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI | 0.61 | 46.0 | 3.40e-01 | 81.7% | 63.4% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.61 | 46.0 | 3.41e-01 | 83.3% | 59.5% |
| 1f20A02 | 1.20.990.10 | Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 | 0.59 | 43.0 | 3.21e-01 | 78.3% | 91.8% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 44.0 | 3.61e-01 | 83.3% | 63.7% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 38.0 | 4.12e-01 | 78.3% | 91.1% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.57 | 42.0 | 3.27e-01 | 80.0% | 36.7% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.57 | 38.0 | 3.43e-01 | 71.7% | 50.0% |
| 1ewfA02 | 3.15.20.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 | 0.56 | 45.0 | 3.02e-01 | 95.0% | 43.8% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 40.0 | 3.25e-01 | 78.3% | 39.7% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 38.0 | 3.34e-01 | 73.3% | 54.7% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 40.0 | 3.56e-01 | 78.3% | 60.4% |
| 1c9rA04 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 39.0 | 3.26e-01 | 78.3% | 83.2% |
| 1zkkB00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.54 | 37.0 | 2.82e-01 | 73.3% | 68.3% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.53 | 39.0 | 2.91e-01 | 85.0% | 34.6% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 38.0 | 2.50e-01 | 76.7% | 29.1% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.53 | 35.0 | 3.41e-01 | 80.0% | 60.0% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 38.0 | 3.34e-01 | 80.0% | 63.0% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 37.0 | 2.99e-01 | 78.3% | 53.6% |
| 1p5uB00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.53 | 38.0 | 3.05e-01 | 83.3% | 81.9% |
| 4l8oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 2.66e-01 | 70.0% | 35.4% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.51 | 36.0 | 2.23e-01 | 75.0% | 30.7% |
| 1sb2B00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.51 | 39.0 | 3.07e-01 | 83.3% | 44.4% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 33.0 | 3.62e-01 | 78.3% | 93.3% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029487 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.68 | 51.0 | 3.58e-01 | 83.3% | 79.0% |
| 3604100 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 45.0 | 3.16e-01 | 70.0% | 94.7% |
| 3169317 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.66 | 49.0 | 3.02e-01 | 81.7% | 89.7% |
| 5000262 | 5.1.11.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_CGLA | 0.66 | 45.0 | 2.73e-01 | 71.7% | 12.7% |
| 3834102 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 47.0 | 2.86e-01 | 78.3% | 11.7% |
| 3057477 | 220.1.1.146 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N | 0.63 | 48.0 | 4.20e-01 | 83.3% | 86.8% |
| 3854926 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.62 | 47.0 | 2.89e-01 | 85.0% | 27.9% |
| 3938638 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.61 | 49.0 | 3.39e-01 | 91.7% | 47.3% |
| 3223921 | 2484.1.1.259 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 | 0.61 | 43.0 | 3.79e-01 | 75.0% | 83.3% |
| 3506512 | 2.1.1.168 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF1980_C | 0.59 | 43.0 | 3.86e-01 | 80.0% | 53.3% |
| 2087183 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 42.0 | 3.01e-01 | 76.7% | 35.9% |
| 3708505 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 45.0 | 3.58e-01 | 88.3% | 79.3% |
| 3890507 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.58 | 36.0 | 2.40e-01 | 80.0% | 15.7% |
| 4408649 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.57 | 43.0 | 2.98e-01 | 83.3% | 95.6% |
| 3722420 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.57 | 43.0 | 3.23e-01 | 83.3% | 42.5% |
| 1075289 | 2.4.1.5 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › GlcV_C_terminal | 0.57 | 37.0 | 3.71e-01 | 78.3% | 64.1% |
| 4371680 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.57 | 42.0 | 2.97e-01 | 81.7% | 85.3% |
| 3593985 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 3.74e-01 | 90.0% | 92.7% |
| 3168711 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.56 | 43.0 | 3.25e-01 | 86.7% | 39.0% |
| 4028425 | 220.1.1.286 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERLI1 | 0.56 | 43.0 | 3.41e-01 | 83.3% | 78.5% |
| 4126573 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.56 | 41.0 | 2.91e-01 | 81.7% | 44.3% |
| 3922213 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.56 | 44.0 | 3.02e-01 | 91.7% | 50.6% |
| 4336711 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.55 | 41.0 | 2.83e-01 | 81.7% | 40.4% |
| 3804776 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.55 | 39.0 | 2.57e-01 | 80.0% | 97.7% |
| 135584 | 11.1.5.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Antig_Caf1 | 0.54 | 41.0 | 3.16e-01 | 81.7% | 57.1% |
| 1665018 | 298.1.1.6 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C | 0.53 | 39.0 | 2.52e-01 | 76.7% | 34.6% |
| 1099004 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.53 | 31.0 | 3.24e-01 | 78.3% | 56.4% |
| 3536447 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.53 | 37.0 | 2.90e-01 | 76.7% | 51.7% |
| 4025949 | 220.1.1.92 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH | 0.52 | 38.0 | 3.08e-01 | 81.7% | 76.0% |
| 5002376 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 38.0 | 3.25e-01 | 80.0% | 73.3% |
| 5012583 | 11.1.4.106 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PEGA | 0.51 | 38.0 | 2.91e-01 | 81.7% | 53.6% |
| 3261637 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 34.0 | 3.39e-01 | 86.7% | 64.6% |
| 3995160 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.50 | 35.0 | 3.74e-01 | 75.0% | 96.0% |