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LC545443.1__BCD83085.1__NrS2_35__00035

Bact-Vir

LC545443.1__BCD83085.1__NrS2_35__00035

Identity

Accession:
LC545443 ↗
Kingdom:
phage

Quality

78.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nitratiruptor_phage_NrS-2

TaxID: 2725864

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 90-248
PDB
Domain cluster: rep: KR093637.1__AKI27556.1__X__00017__D1-33_82-122_175-278
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6p1hB02 2.40.50.430 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 40.0 4.34e-01 97.5% 73.2%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 39.0 4.03e-01 99.4% 65.1%
2i06A02 3.30.54.10 Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › 0.61 31.0 4.25e-01 86.2% 97.4%
6rarI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 35.0 4.47e-01 92.5% 100.0%
3hl6A02 1.20.58.700 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 23.0 2.69e-01 76.1% 49.6%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4941125 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 39.0 4.63e-01 98.1% 77.4%
4993340 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 41.0 5.23e-01 98.1% 98.0%
3731897 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 44.0 4.68e-01 99.4% 73.6%
3695426 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.67 43.0 4.37e-01 99.4% 64.4%
5043054 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 40.0 4.97e-01 99.4% 98.0%
4015838 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 41.0 4.16e-01 99.4% 63.9%
7636 4053.1.1.1 ↗ a+b complex topology › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Ter 0.64 27.0 4.18e-01 91.2% 98.4%
3614693 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 40.0 4.29e-01 99.4% 73.3%
1447954 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 39.0 4.22e-01 99.4% 71.7%
3596924 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 39.0 4.18e-01 99.4% 72.1%
4945474 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 41.0 4.65e-01 100.0% 89.2%
3929346 2.1.1.39 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 0.57 41.0 4.66e-01 99.4% 99.2%
3655774 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 39.0 4.13e-01 100.0% 82.1%
4032267 2.1.1.221 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6414 0.53 36.0 4.19e-01 83.6% 100.0%
4024449 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 42.0 4.13e-01 99.4% 76.0%
3261596 2.1.1.82 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.52 32.0 3.56e-01 93.7% 76.8%
5050503 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 43.0 3.13e-01 90.6% 71.5%