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LC545445.1__BCD83218.1__NrS4_36__00036
Bact-VirLC545445.1__BCD83218.1__NrS4_36__00036
Identity
- Accession:
- LC545445 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-98
Domain cluster:
rep: IMGVR_UViG_3300025787_000065-3300025787-Ga0210047_100215215__D29-122
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 39.0 | 3.51e-01 | 76.3% | 47.1% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.69e-01 | 73.2% | 92.8% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 24.0 | 3.27e-01 | 75.3% | 83.3% |
| 2kt9A01 | 3.30.390.140 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.56 | 44.0 | 4.37e-01 | 84.5% | 93.9% |
| 3to7A01 | 3.30.60.60 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › N-acetyl transferase-like | 0.55 | 27.0 | 3.28e-01 | 100.0% | 77.4% |
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 46.0 | 4.10e-01 | 92.8% | 79.6% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.52 | 29.0 | 3.36e-01 | 76.3% | 80.6% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 35.0 | 2.81e-01 | 73.2% | 70.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3373308 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 39.0 | 4.57e-01 | 91.8% | 92.3% |
| 1173242 | 4999.1.1.1 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX | 0.57 | 31.0 | 3.69e-01 | 100.0% | 82.0% |
| 4314348 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.56 | 38.0 | 3.06e-01 | 71.1% | 75.3% |
| 3576744 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.55 | 30.0 | 3.57e-01 | 89.7% | 78.5% |
| 3666060 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.54 | 45.0 | 3.29e-01 | 93.8% | 63.4% |
| 5038315 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 25.0 | 3.15e-01 | 70.1% | 77.6% |
| 3950933 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.52 | 43.0 | 3.25e-01 | 94.8% | 64.2% |
| 4414555 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.50 | 42.0 | 3.11e-01 | 92.8% | 65.6% |
| 3683264 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.50 | 38.0 | 3.20e-01 | 84.5% | 87.0% |