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LC554890.1__BCG50033.1__X__00015
Bact-VirLC554890.1__BCG50033.1__X__00015
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-78
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 47.0 | 4.88e-01 | 98.6% | 100.0% |
| 8oh5B01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 40.0 | 3.69e-01 | 100.0% | 59.2% |
| 4nhxA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 39.0 | 2.89e-01 | 83.8% | 91.4% |
| 3rkxA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 44.0 | 3.31e-01 | 100.0% | 85.5% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 37.0 | 3.52e-01 | 79.7% | 95.8% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.50 | 43.0 | 3.18e-01 | 100.0% | 51.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3246514 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.55 | 48.0 | 3.40e-01 | 98.6% | 54.3% |
| 3590557 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.55 | 44.0 | 3.23e-01 | 87.8% | 41.0% |
| 3626375 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.55 | 39.0 | 4.05e-01 | 98.6% | 82.9% |
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.52 | 35.0 | 3.79e-01 | 98.6% | 92.7% |
| 4200312 | 601.1.2.11 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CD20 | 0.51 | 31.0 | 2.36e-01 | 86.5% | 23.8% |
| 3994028 | 5.1.3.205 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_RIC1_2nd | 0.50 | 41.0 | 2.41e-01 | 97.3% | 44.0% |