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LC554890.1__BCG50078.1__X__00060
Bact-VirLC554890.1__BCG50078.1__X__00060
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Cluster
View cluster (49 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 154-291
D2
high
residues 403-525
D3
medium
residues 16-81_544-617
Domain cluster:
rep: KT624200.1__AMM44842.1__SP15_043__00044__D22-84_198-292
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.93 | 87.0 | 7.27e-01 | 97.1% | 73.2% |
| 5hsgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 48.0 | 5.12e-01 | 95.0% | 75.2% |
| 1gudA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 49.0 | 4.93e-01 | 96.4% | 70.5% |
| 4yleA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 51.0 | 5.03e-01 | 97.1% | 71.2% |
| 4irxA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 47.0 | 4.84e-01 | 96.4% | 71.6% |
| 1gt9100 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.69 | 62.0 | 4.56e-01 | 97.1% | 63.9% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 48.0 | 4.53e-01 | 97.9% | 60.5% |
| 3h5tA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 57.0 | 5.48e-01 | 96.4% | 79.6% |
| 3n0xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 51.0 | 4.45e-01 | 95.7% | 53.6% |
| 1ujnA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 47.0 | 4.56e-01 | 96.4% | 64.6% |
| 3bedA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.66 | 42.0 | 4.39e-01 | 80.7% | 69.2% |
| 4ea9A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 39.0 | 4.82e-01 | 78.6% | 94.4% |
| 3mtqB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.63 | 42.0 | 4.31e-01 | 84.3% | 68.6% |
| 3ujpA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.62 | 41.0 | 4.46e-01 | 92.9% | 80.9% |
| 2haeA01 | 3.40.50.10380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Malic enzyme, N-terminal domain | 0.62 | 45.0 | 4.37e-01 | 82.1% | 67.8% |
| 3kkeB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 44.0 | 4.42e-01 | 100.0% | 71.5% |
| 3qitB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 50.0 | 3.99e-01 | 87.1% | 85.5% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 44.0 | 4.61e-01 | 83.6% | 81.2% |
| 2i9uA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 48.0 | 3.70e-01 | 97.1% | 38.0% |
| 5gneA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 46.0 | 3.72e-01 | 81.4% | 79.7% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 52.0 | 4.43e-01 | 95.0% | 70.2% |
| 2o2gA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 53.0 | 4.59e-01 | 97.1% | 70.8% |
| 3hh8A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.59 | 40.0 | 4.16e-01 | 93.6% | 73.3% |
| 3ewaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 54.0 | 4.47e-01 | 100.0% | 57.0% |
| 3fpfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 47.0 | 3.79e-01 | 97.1% | 44.3% |
| 4ncbA05 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 40.0 | 4.02e-01 | 85.0% | 67.3% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 4.30e-01 | 97.9% | 75.5% |
| 3o3mB02 | 3.40.50.11890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 4.58e-01 | 91.4% | 86.5% |
| 3f4wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 41.0 | 3.60e-01 | 93.6% | 47.9% |
| 4g65A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 45.0 | 4.62e-01 | 94.3% | 84.1% |
| 5h80A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 46.0 | 4.80e-01 | 95.7% | 91.4% |
| 4jhmA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.58 | 41.0 | 3.40e-01 | 96.4% | 40.1% |
| 2rjoA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 51.0 | 4.74e-01 | 96.4% | 79.2% |
| 4yo7A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 50.0 | 4.89e-01 | 95.7% | 86.5% |
| 3nklB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 46.0 | 4.87e-01 | 96.4% | 96.7% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 44.0 | 4.49e-01 | 95.7% | 85.8% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 50.0 | 4.76e-01 | 96.4% | 94.5% |
| 1b30A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 43.0 | 3.35e-01 | 80.7% | 68.1% |
| 4g41A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.55 | 47.0 | 3.90e-01 | 90.0% | 87.3% |
| 3ejgA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.55 | 48.0 | 4.59e-01 | 95.7% | 82.4% |
| 4iilA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 49.0 | 4.96e-01 | 95.0% | 97.8% |
| 1szpB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 51.0 | 4.40e-01 | 100.0% | 82.0% |
| 3ibtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 47.0 | 4.28e-01 | 95.0% | 75.6% |
| 1r5jA01 | 3.40.50.10950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 4.10e-01 | 85.0% | 82.0% |
| 3r14A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 4.16e-01 | 95.7% | 63.1% |
| 3d02A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 47.0 | 4.68e-01 | 93.6% | 98.0% |
| 4n82B00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 42.0 | 4.13e-01 | 95.7% | 75.8% |
| 4kvfA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 49.0 | 4.65e-01 | 96.4% | 94.4% |
| 1u3dA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 42.0 | 4.01e-01 | 82.1% | 79.5% |
| 5l3qB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 3.99e-01 | 97.9% | 81.4% |
| 3n4fA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.53 | 41.0 | 3.37e-01 | 95.7% | 43.3% |
| 1q7zA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.53 | 47.0 | 3.69e-01 | 97.9% | 63.0% |
| 5bxyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 4.17e-01 | 92.1% | 77.3% |
| 3hi0A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 4.20e-01 | 82.9% | 91.5% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 3.71e-01 | 97.1% | 60.4% |
| 2qgqA01 | 3.80.30.20 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › tm_1862 like domain | 0.52 | 45.0 | 3.96e-01 | 96.4% | 62.3% |
| 1u6zA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 38.0 | 4.06e-01 | 81.4% | 87.5% |
| 4kigA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 4.22e-01 | 95.0% | 85.4% |
| 3thxA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.52 | 34.0 | 3.26e-01 | 85.7% | 54.5% |
| 3lyeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.52 | 46.0 | 3.68e-01 | 97.9% | 60.4% |
| 1w96C01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 48.0 | 4.54e-01 | 100.0% | 89.7% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 4.26e-01 | 92.9% | 83.6% |
| 2o1mA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 34.0 | 3.58e-01 | 87.9% | 74.4% |
| 3tb6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.54e-01 | 93.6% | 97.8% |
| 4djaA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 38.0 | 3.70e-01 | 83.6% | 66.9% |
| 3e66A01 | 3.30.420.230 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region | 0.51 | 40.0 | 3.90e-01 | 83.6% | 72.7% |
| 3e74A02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 44.0 | 3.35e-01 | 94.3% | 45.6% |
| 1dg3A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.75e-01 | 97.1% | 61.7% |
| 2ziuB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 39.0 | 3.86e-01 | 97.1% | 77.9% |
| 3lpmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 44.0 | 3.84e-01 | 95.7% | 67.0% |
| 1g8fA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 3.74e-01 | 87.9% | 82.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.92 | 88.0 | 6.94e-01 | 99.3% | 57.3% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.86 | 82.0 | 6.31e-01 | 99.3% | 58.9% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.77 | 69.0 | 5.78e-01 | 94.3% | 60.0% |
| 3722224 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.66 | 47.0 | 5.11e-01 | 85.0% | 86.4% |
| 3472776 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.66 | 46.0 | 4.55e-01 | 96.4% | 68.3% |
| 3589573 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.65 | 46.0 | 4.94e-01 | 95.0% | 84.2% |
| 4984246 | 2007.3.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Citrate_bind | 0.65 | 48.0 | 4.41e-01 | 95.7% | 58.9% |
| 5056466 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.63 | 48.0 | 4.34e-01 | 95.0% | 58.4% |
| 2032483 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.63 | 40.0 | 3.92e-01 | 87.1% | 57.0% |
| 4165287 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.62 | 45.0 | 4.04e-01 | 97.1% | 53.0% |
| 4628796 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.62 | 46.0 | 4.48e-01 | 97.9% | 70.3% |
| 1227073 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.62 | 50.0 | 3.99e-01 | 87.1% | 85.5% |
| 4480051 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.61 | 43.0 | 4.05e-01 | 96.4% | 59.4% |
| 3916545 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.60 | 44.0 | 3.94e-01 | 85.0% | 54.4% |
| 3512774 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.60 | 44.0 | 4.11e-01 | 85.7% | 61.1% |
| 5077114 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.60 | 43.0 | 4.13e-01 | 76.4% | 65.0% |
| 3687308 | 2003.1.10.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Biotin_carb_N | 0.59 | 45.0 | 4.81e-01 | 96.4% | 91.7% |
| 5026623 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.59 | 50.0 | 3.94e-01 | 97.9% | 45.0% |
| 3288723 | 2007.1.19.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 | 0.59 | 48.0 | 3.71e-01 | 85.7% | 81.4% |
| 2625870 | 7590.1.1.5 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Ago_Mid | 0.59 | 41.0 | 3.99e-01 | 85.0% | 65.1% |
| 3696146 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.58 | 52.0 | 3.93e-01 | 96.4% | 50.5% |
| 4967850 | 2005.1.1.20 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI | 0.58 | 46.0 | 4.60e-01 | 84.3% | 89.7% |
| 4943774 | 2484.1.1.94 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C_2 | 0.57 | 38.0 | 4.08e-01 | 83.6% | 80.0% |
| 5048362 | 2484.1.1.80 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C | 0.57 | 37.0 | 3.95e-01 | 83.6% | 73.6% |
| 5076719 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.57 | 51.0 | 4.61e-01 | 97.1% | 82.6% |
| 3502242 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 46.0 | 4.44e-01 | 97.1% | 75.6% |
| 4986411 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.57 | 44.0 | 3.91e-01 | 96.4% | 57.1% |
| 5021005 | 2003.1.5.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NAS | 0.57 | 47.0 | 3.65e-01 | 97.1% | 41.7% |
| 5058372 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.57 | 47.0 | 4.24e-01 | 95.0% | 64.1% |
| 4406429 | 2005.1.1.8 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth | 0.57 | 47.0 | 4.34e-01 | 87.9% | 88.6% |
| 3209470 | 7512.1.1.95 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PF28142 | 0.56 | 45.0 | 4.17e-01 | 83.6% | 75.4% |
| 3731880 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.56 | 47.0 | 4.18e-01 | 92.1% | 78.9% |
| 3423082 | 7566.1.1.1 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N,GTP-bdg_M | 0.55 | 49.0 | 4.36e-01 | 96.4% | 69.0% |
| 3678933 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.55 | 44.0 | 4.01e-01 | 85.0% | 64.9% |
| 3326510 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.55 | 41.0 | 3.25e-01 | 94.3% | 37.6% |
| 3172939 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 38.0 | 3.54e-01 | 82.9% | 55.6% |
| 4985740 | 2003.1.5.80 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 | 0.54 | 47.0 | 4.46e-01 | 97.1% | 79.4% |
| 3601450 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.54 | 35.0 | 3.24e-01 | 85.0% | 51.1% |
| 3979078 | 7594.1.1.1 ↗ | a/b three-layered sandwiches › Hydrogenase expression/formation protein HypD › Hydrogenase expression/formation protein HypD › Hydrogenase expression/formation protein HypD › HypD | 0.54 | 47.0 | 4.09e-01 | 98.6% | 62.4% |
| 3938885 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.54 | 46.0 | 3.23e-01 | 91.4% | 47.4% |
| 3594808 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.53 | 43.0 | 3.66e-01 | 85.7% | 87.7% |
| 3691474 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.53 | 47.0 | 3.52e-01 | 96.4% | 63.1% |
| 4954442 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.53 | 36.0 | 3.58e-01 | 85.7% | 65.5% |
| 4393026 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.53 | 39.0 | 4.09e-01 | 83.6% | 84.6% |
| 4546316 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.53 | 45.0 | 3.86e-01 | 92.9% | 81.3% |
| 5083403 | 2005.1.1.16 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 | 0.52 | 45.0 | 3.86e-01 | 93.6% | 70.4% |
| 4447684 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.52 | 40.0 | 3.84e-01 | 81.4% | 70.0% |
| 9465 | 2003.1.10.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Biotin_carb_N | 0.52 | 48.0 | 4.50e-01 | 100.0% | 86.5% |
| 3654037 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.52 | 36.0 | 3.08e-01 | 70.0% | 59.1% |
| 5017818 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.52 | 44.0 | 3.58e-01 | 95.7% | 47.3% |
| 3739558 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.52 | 47.0 | 3.88e-01 | 98.6% | 75.9% |
| 9797 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.52 | 43.0 | 4.08e-01 | 90.7% | 77.1% |
| 4286517 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.52 | 43.0 | 4.50e-01 | 95.0% | 99.2% |
| 2896184 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.52 | 47.0 | 3.87e-01 | 97.1% | 58.7% |
| 5022993 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 40.0 | 3.95e-01 | 82.9% | 91.5% |
| 5072429 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.51 | 45.0 | 4.13e-01 | 95.7% | 80.5% |
| 3588390 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.51 | 39.0 | 3.40e-01 | 80.0% | 87.0% |
| 4943294 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.51 | 40.0 | 3.83e-01 | 97.1% | 72.5% |
| 4014203 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 43.0 | 3.44e-01 | 94.3% | 49.7% |
| 3785918 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.51 | 45.0 | 3.92e-01 | 99.3% | 75.9% |
| 5075835 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.51 | 36.0 | 3.79e-01 | 84.3% | 80.8% |
| None | — | 0.51 | 46.0 | 3.78e-01 | 97.9% | 58.8% | |
| 3190980 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.50 | 40.0 | 3.84e-01 | 85.7% | 80.6% |
D4
medium
residues 82-131_310-401_526-543
Domain cluster:
rep: MT366761.1__QJT71116.1__GR11A_00079__00078__D93-218
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.88 | 49.0 | 6.64e-01 | 97.5% | 100.0% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.87 | 46.0 | 6.41e-01 | 92.5% | 100.0% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 23.0 | 3.32e-01 | 70.0% | 82.1% |
| 2arhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 30.0 | 3.09e-01 | 75.0% | 58.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 223843 | 3629.1.1.1 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Phage_sheath_domII | 0.88 | 49.0 | 6.61e-01 | 96.9% | 100.0% |
| 1176366 | 3629.1.1.1 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Phage_sheath_domII | 0.87 | 51.0 | 6.66e-01 | 98.1% | 100.0% |
| 4995821 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.81 | 77.0 | 7.73e-01 | 97.5% | 100.0% |
| 358962 | 4401.1.1.1 ↗ | a+b complex topology › Domain II in tail sheath protein Gp18 › Domain II in tail sheath protein Gp18 › Domain II in tail sheath protein Gp18 › Phage_sheath_domII | 0.77 | 57.0 | 5.58e-01 | 75.0% | 92.9% |
| 5004679 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.66 | 56.0 | 6.05e-01 | 96.2% | 100.0% |
| 3228340 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.65 | 37.0 | 4.64e-01 | 83.1% | 91.0% |
| 3931156 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 27.0 | 3.87e-01 | 73.8% | 85.7% |
| 3507420 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 33.0 | 4.10e-01 | 95.0% | 85.3% |
| 3967128 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 23.0 | 3.25e-01 | 90.0% | 77.1% |
| 5019700 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.56 | 34.0 | 4.24e-01 | 98.1% | 97.0% |
| 4600473 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 26.0 | 2.82e-01 | 90.0% | 51.1% |
| 4963501 | 11.1.1.1049 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7827 | 0.52 | 29.0 | 3.30e-01 | 95.0% | 71.3% |
| 5019486 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.52 | 35.0 | 4.04e-01 | 97.5% | 91.7% |
D5
medium
residues 618-753
Domain cluster:
rep: LC644975.1__BCZ76060.1__X__00055__D244-386
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cufA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 34.0 | 4.41e-01 | 86.0% | 98.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.96 | 72.0 | 5.62e-01 | 76.5% | 42.4% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.95 | 87.0 | 6.60e-01 | 94.1% | 46.4% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.93 | 67.0 | 5.09e-01 | 75.0% | 36.4% |
| 4882286 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.91 | 67.0 | 6.43e-01 | 76.5% | 67.5% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.90 | 66.0 | 5.01e-01 | 75.0% | 37.9% |
| 2468451 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.88 | 62.0 | 5.13e-01 | 75.7% | 44.5% |
| 2141717 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.87 | 65.0 | 4.66e-01 | 75.7% | 58.9% |
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.87 | 63.0 | 4.88e-01 | 74.3% | 38.9% |
| 4889792 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.87 | 63.0 | 5.21e-01 | 77.2% | 45.7% |
| 3947382 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.87 | 64.0 | 4.62e-01 | 75.0% | 59.4% |
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.87 | 54.0 | 4.29e-01 | 80.9% | 34.4% |
| 1515363 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.86 | 63.0 | 4.70e-01 | 75.0% | 66.6% |
| 1518917 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.85 | 62.0 | 4.76e-01 | 75.0% | 38.8% |
| 2832219 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.83 | 64.0 | 4.51e-01 | 79.4% | 42.3% |
| 4988098 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.82 | 52.0 | 4.25e-01 | 80.1% | 37.0% |
| 2468538 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.82 | 61.0 | 4.81e-01 | 76.5% | 54.5% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.76 | 52.0 | 4.29e-01 | 74.3% | 41.8% |
| 3702727 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 34.0 | 3.92e-01 | 86.8% | 85.0% |
D6
medium
residues 754-829
Domain cluster:
rep: rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00065__D802-873
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 45.0 | 4.17e-01 | 73.7% | 48.5% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.72 | 45.0 | 3.97e-01 | 73.7% | 42.9% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 43.0 | 3.96e-01 | 75.0% | 50.0% |
| 2fb0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 42.0 | 3.97e-01 | 75.0% | 51.1% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.66 | 38.0 | 3.10e-01 | 72.4% | 30.6% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 39.0 | 3.66e-01 | 73.7% | 47.4% |
| 2ma4A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.58 | 34.0 | 3.44e-01 | 72.4% | 55.1% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 3.66e-01 | 75.0% | 53.4% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 41.0 | 3.06e-01 | 75.0% | 30.3% |
| 2ymvA02 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 41.0 | 3.01e-01 | 76.3% | 28.1% |
| 2kyyA00 | 3.30.950.30 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Schlafen, AAA domain | 0.56 | 36.0 | 2.93e-01 | 73.7% | 32.0% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 39.0 | 3.50e-01 | 72.4% | 55.7% |
| 4dn2A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.56 | 41.0 | 3.11e-01 | 78.9% | 44.5% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 37.0 | 3.42e-01 | 73.7% | 51.5% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 37.0 | 3.36e-01 | 73.7% | 47.7% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.55 | 36.0 | 3.36e-01 | 73.7% | 52.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4917688 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.91 | 66.0 | 5.93e-01 | 75.0% | 64.0% |
| 4957559 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.91 | 75.0 | 6.69e-01 | 85.5% | 70.0% |
| 2471639 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.91 | 80.0 | 6.90e-01 | 93.4% | 70.3% |
| 2468539 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.88 | 81.0 | 6.91e-01 | 97.4% | 68.7% |
| 3980756 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.87 | 74.0 | 6.53e-01 | 90.8% | 65.7% |
| 3949098 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.86 | 75.0 | 6.56e-01 | 97.4% | 64.5% |
| 2468488 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.84 | 79.0 | 6.81e-01 | 100.0% | 71.2% |
| 1518918 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.79 | 69.0 | 5.96e-01 | 93.4% | 64.3% |
| 3947226 | 283.2.1.10 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 | 0.78 | 63.0 | 5.20e-01 | 86.8% | 72.3% |
| 1713442 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.65 | 46.0 | 4.47e-01 | 75.0% | 88.5% |
| 5065856 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.62 | 42.0 | 3.36e-01 | 73.7% | 33.3% |
| 4936297 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.61 | 43.0 | 3.31e-01 | 75.0% | 34.3% |
| 5041889 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 42.0 | 3.16e-01 | 73.7% | 96.5% |
| 4859785 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.57 | 40.0 | 3.59e-01 | 75.0% | 51.9% |
| 3689239 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.57 | 38.0 | 3.69e-01 | 78.9% | 61.2% |
| 3550113 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.56 | 38.0 | 3.24e-01 | 72.4% | 42.4% |
| 4554366 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.56 | 38.0 | 3.32e-01 | 72.4% | 46.1% |
| 4954445 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.55 | 38.0 | 2.95e-01 | 73.7% | 32.8% |
| 5165 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.55 | 36.0 | 3.36e-01 | 73.7% | 52.0% |
| 3508551 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.55 | 37.0 | 3.21e-01 | 72.4% | 44.2% |
| 3619356 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.52 | 39.0 | 2.94e-01 | 82.9% | 75.7% |