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LC554890.1__BCG50082.1__X__00064
Bact-VirLC554890.1__BCG50082.1__X__00064
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
81.0
mean pLDDT
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-48_129-201
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.70 | 42.0 | 4.37e-01 | 71.4% | 63.2% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.68 | 39.0 | 3.80e-01 | 79.8% | 50.4% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 38.0 | 4.76e-01 | 89.1% | 90.5% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.64 | 44.0 | 4.40e-01 | 79.0% | 69.2% |
| 4wk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 58.0 | 4.46e-01 | 99.2% | 71.5% |
| 4jvsA01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 43.0 | 4.28e-01 | 72.3% | 65.9% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 39.0 | 4.20e-01 | 72.3% | 73.8% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 46.0 | 3.40e-01 | 79.0% | 68.5% |
| 1ciyA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.61 | 46.0 | 3.77e-01 | 79.8% | 79.6% |
| 5tqbB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 44.0 | 3.14e-01 | 100.0% | 26.8% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.61 | 46.0 | 4.01e-01 | 79.8% | 93.3% |
| 1jmwA00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.60 | 39.0 | 3.68e-01 | 75.6% | 53.4% |
| 3gi8C00 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.60 | 54.0 | 3.65e-01 | 97.5% | 89.2% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.59 | 37.0 | 3.72e-01 | 78.2% | 62.2% |
| 3lk5A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.58 | 52.0 | 3.82e-01 | 100.0% | 94.9% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 41.0 | 3.94e-01 | 73.1% | 64.0% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 49.0 | 4.51e-01 | 92.4% | 90.1% |
| 2h8oA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 50.0 | 3.87e-01 | 100.0% | 68.9% |
| 2ks9A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 43.0 | 3.01e-01 | 79.0% | 57.6% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 39.0 | 4.38e-01 | 92.4% | 90.3% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.56 | 40.0 | 3.95e-01 | 79.0% | 69.6% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 45.0 | 3.97e-01 | 89.1% | 62.8% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 46.0 | 4.49e-01 | 93.3% | 100.0% |
| 2wb0X01 | 1.10.269.10 | Mainly Alpha › Orthogonal Bundle › Adenovirus Single-stranded Dna-binding Protein, domain 1 › Adenovirus DNA-binding, N-terminal domain | 0.54 | 35.0 | 3.60e-01 | 89.1% | 66.7% |
| 2r5sA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 29.0 | 3.44e-01 | 96.6% | 75.9% |
| 3piwA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 44.0 | 4.03e-01 | 93.3% | 67.5% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 40.0 | 3.27e-01 | 79.0% | 78.0% |
| 4rfsS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.52 | 46.0 | 4.05e-01 | 100.0% | 90.4% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 44.0 | 4.08e-01 | 91.6% | 72.0% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 38.0 | 3.54e-01 | 78.2% | 62.2% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 42.0 | 4.25e-01 | 91.6% | 89.2% |
| 2l5aA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 40.0 | 3.28e-01 | 84.0% | 93.8% |
| 2ntxA02 | 1.20.58.1310 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 2 | 0.51 | 33.0 | 3.52e-01 | 89.1% | 74.8% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.51 | 44.0 | 3.82e-01 | 98.3% | 87.6% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.51 | 39.0 | 4.07e-01 | 86.6% | 85.7% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 42.0 | 4.06e-01 | 90.8% | 89.1% |
| 3o10C00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 35.0 | 3.41e-01 | 72.3% | 72.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946692 | 5001.1.1.293 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › MASE3 | 0.63 | 40.0 | 3.20e-01 | 74.8% | 34.1% |
| 3598468 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.61 | 54.0 | 3.72e-01 | 95.8% | 94.5% |
| 3377749 | 3843.1.1.15 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › ETR1_N | 0.61 | 43.0 | 4.64e-01 | 79.0% | 87.0% |
| 3446288 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.61 | 44.0 | 4.18e-01 | 79.8% | 63.6% |
| 3978522 | 1014.1.1.1 ↗ | alpha arrays › AopB › AopB › AopB › SseC | 0.60 | 41.0 | 3.48e-01 | 73.9% | 43.2% |
| 3581098 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.59 | 44.0 | 4.64e-01 | 77.3% | 98.1% |
| 3584009 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.58 | 44.0 | 3.45e-01 | 79.0% | 92.7% |
| 3171135 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.58 | 50.0 | 4.25e-01 | 93.3% | 80.0% |
| 4440484 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.57 | 49.0 | 4.56e-01 | 91.6% | 84.1% |
| 3276289 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.57 | 49.0 | 4.01e-01 | 94.1% | 88.9% |
| 5019781 | 5001.1.1.293 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › MASE3 | 0.57 | 43.0 | 3.49e-01 | 79.8% | 73.0% |
| 3221903 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.56 | 47.0 | 3.27e-01 | 92.4% | 91.3% |
| 3743177 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.56 | 48.0 | 4.53e-01 | 93.3% | 84.1% |
| 4878961 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 42.0 | 4.43e-01 | 79.0% | 91.6% |
| 5010914 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.55 | 47.0 | 4.65e-01 | 94.1% | 96.2% |
| 3934749 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 40.0 | 3.89e-01 | 75.6% | 69.6% |
| 3783911 | 633.6.1.24 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › FKS1_dom2 | 0.54 | 43.0 | 4.03e-01 | 83.2% | 75.9% |
| 4101922 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.54 | 46.0 | 3.94e-01 | 94.1% | 67.0% |
| 3888824 | 601.1.2.11 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CD20 | 0.54 | 41.0 | 3.79e-01 | 79.0% | 62.7% |
| 5041130 | 601.14.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin | 0.54 | 40.0 | 4.01e-01 | 78.2% | 76.8% |
| 3488077 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 38.0 | 4.19e-01 | 87.4% | 90.5% |
| 5080354 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.52 | 46.0 | 3.70e-01 | 98.3% | 78.3% |
| 3230341 | 5054.1.1.17 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TRAM_LAG1_CLN8 | 0.52 | 47.0 | 3.76e-01 | 100.0% | 84.3% |
| 4026675 | 603.1.1.172 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF1617 | 0.52 | 38.0 | 3.92e-01 | 92.4% | 80.0% |
| 3289317 | 191.1.1.41 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › EthR_C | 0.52 | 38.0 | 3.54e-01 | 80.7% | 61.3% |
| 3690392 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.51 | 46.0 | 3.98e-01 | 99.2% | 71.9% |
| 4382088 | 1175.1.1.1 ↗ | alpha complex topology › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › LNT_N | 0.51 | 44.0 | 3.49e-01 | 94.1% | 52.8% |
| 3911777 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.51 | 43.0 | 4.20e-01 | 93.3% | 92.6% |
| 4432227 | 604.1.1.161 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27599 | 0.51 | 38.0 | 3.13e-01 | 92.4% | 44.4% |
| 4936976 | 633.10.1.2 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Bbp7-like | 0.51 | 41.0 | 4.28e-01 | 90.8% | 99.0% |
| 3388493 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.51 | 42.0 | 4.10e-01 | 89.9% | 92.3% |
| 5004717 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 47.0 | 3.61e-01 | 100.0% | 64.8% |
| 3910597 | 603.1.1.8 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Spectrin_2 | 0.50 | 35.0 | 3.44e-01 | 91.6% | 66.4% |
| 3285767 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.50 | 38.0 | 3.95e-01 | 80.7% | 95.4% |
| 3289973 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.50 | 36.0 | 3.52e-01 | 80.7% | 65.9% |
D2
high
residues 50-125
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b34A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.67 | 54.0 | 4.02e-01 | 100.0% | 36.1% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.66 | 58.0 | 4.27e-01 | 100.0% | 38.9% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 56.0 | 4.49e-01 | 100.0% | 62.7% |
| 7o0eA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 49.0 | 4.85e-01 | 100.0% | 79.5% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 56.0 | 4.68e-01 | 100.0% | 64.4% |
| 3drxB03 | 3.30.70.2000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 37.0 | 4.35e-01 | 100.0% | 88.2% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.61 | 42.0 | 4.49e-01 | 100.0% | 85.9% |
| 1qw9A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 53.0 | 4.45e-01 | 100.0% | 62.4% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 51.0 | 4.34e-01 | 97.4% | 75.4% |
| 3t30C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.57 | 49.0 | 4.60e-01 | 100.0% | 100.0% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 50.0 | 4.79e-01 | 98.7% | 100.0% |
| 1wzaA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 41.0 | 4.08e-01 | 98.7% | 74.7% |
| 2zx2A01 | 2.60.120.740 | Mainly Beta › Sandwich › Jelly Rolls › Rhamnose-binding lectin domain (RBL) | 0.56 | 47.0 | 4.42e-01 | 97.4% | 96.9% |
| 2ya0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 44.0 | 4.09e-01 | 98.7% | 66.3% |
| 2j1aA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 48.0 | 3.99e-01 | 100.0% | 56.7% |
| 1uf2C02 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.79e-01 | 100.0% | 94.9% |
| 3lsoA01 | 2.60.40.2270 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 3.70e-01 | 100.0% | 78.6% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 3.79e-01 | 86.8% | 84.4% |
| 1tvgA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 3.87e-01 | 100.0% | 56.6% |
| 7tg5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 45.0 | 4.07e-01 | 100.0% | 68.2% |
| 2yc2A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 3.82e-01 | 100.0% | 56.8% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.48e-01 | 97.4% | 98.2% |
| 6mfaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.94e-01 | 90.8% | 79.7% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 45.0 | 3.59e-01 | 98.7% | 96.2% |
| 4byfA01 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 38.0 | 3.66e-01 | 80.3% | 73.3% |
| 2zf8A01 | 2.60.40.2540 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.52e-01 | 98.7% | 77.3% |
| 2wb7A02 | 2.60.40.2050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.49e-01 | 97.4% | 60.0% |
| 1wmxA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.51 | 42.0 | 3.40e-01 | 98.7% | 99.4% |
| 5f1sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.82e-01 | 93.4% | 86.3% |
| 1yllA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 4.19e-01 | 100.0% | 82.6% |
| 6ui4A03 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 39.0 | 3.78e-01 | 82.9% | 83.7% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.50 | 41.0 | 3.73e-01 | 94.7% | 78.6% |
| 1n9pA00 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.50 | 42.0 | 3.17e-01 | 94.7% | 53.8% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 43.0 | 3.96e-01 | 100.0% | 72.8% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.50 | 41.0 | 3.51e-01 | 94.7% | 86.8% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033016 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.69 | 55.0 | 5.44e-01 | 100.0% | 81.2% |
| 5010111 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 54.0 | 4.58e-01 | 97.4% | 52.8% |
| 4945556 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.66 | 53.0 | 3.99e-01 | 100.0% | 36.2% |
| 3973010 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.65 | 54.0 | 4.04e-01 | 100.0% | 36.8% |
| 5010198 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.64 | 51.0 | 4.31e-01 | 94.7% | 52.0% |
| 4532823 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 54.0 | 4.57e-01 | 100.0% | 62.4% |
| 4241283 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.61 | 53.0 | 4.33e-01 | 100.0% | 56.0% |
| 3586909 | 12.1.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C | 0.61 | 53.0 | 4.54e-01 | 100.0% | 63.1% |
| 5029288 | 11.1.5.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin | 0.61 | 54.0 | 4.39e-01 | 100.0% | 63.4% |
| 5025924 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.60 | 53.0 | 4.61e-01 | 100.0% | 81.7% |
| 3182961 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.07e-01 | 90.8% | 81.5% |
| 4946319 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 53.0 | 5.11e-01 | 100.0% | 95.3% |
| 3794768 | 10.32.1.28 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC | 0.58 | 50.0 | 3.87e-01 | 97.4% | 85.7% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.58 | 51.0 | 4.58e-01 | 98.7% | 94.3% |
| 1698194 | 12.1.1.26 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_79C | 0.57 | 49.0 | 4.25e-01 | 98.7% | 72.6% |
| 4937082 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 49.0 | 3.88e-01 | 96.1% | 46.9% |
| 3285854 | 4182.1.1.0 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like | 0.57 | 49.0 | 4.23e-01 | 100.0% | 83.7% |
| 3506484 | 12.5.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 | 0.57 | 50.0 | 3.96e-01 | 98.7% | 66.3% |
| 3500032 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 49.0 | 4.31e-01 | 100.0% | 77.5% |
| 3414285 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.64e-01 | 100.0% | 82.0% |
| 3797634 | 10.30.1.0 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain | 0.57 | 48.0 | 4.44e-01 | 98.7% | 98.0% |
| 1954233 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.57 | 48.0 | 4.60e-01 | 97.4% | 97.8% |
| 3548353 | 12.2.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 | 0.56 | 48.0 | 4.06e-01 | 100.0% | 58.5% |
| 4270536 | 1.1.7.96 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FIST_C | 0.55 | 46.0 | 4.26e-01 | 94.7% | 95.0% |
| 3415410 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 49.0 | 4.58e-01 | 100.0% | 85.3% |
| 4375651 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.55 | 47.0 | 4.23e-01 | 100.0% | 74.5% |
| 1887972 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.55 | 47.0 | 4.12e-01 | 98.7% | 67.5% |
| 5010649 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 41.0 | 3.99e-01 | 100.0% | 71.6% |
| 3392644 | 10.30.1.1 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin | 0.54 | 45.0 | 4.20e-01 | 100.0% | 94.3% |
| 4343101 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.54 | 47.0 | 3.59e-01 | 100.0% | 51.1% |
| 4235514 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.54 | 46.0 | 4.06e-01 | 98.7% | 69.5% |
| 3975923 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 44.0 | 3.28e-01 | 93.4% | 82.3% |
| 3559886 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 45.0 | 3.91e-01 | 100.0% | 80.8% |
| 3183254 | 10.32.1.237 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mid1 | 0.53 | 46.0 | 3.93e-01 | 100.0% | 80.0% |
| 3508268 | 206.1.1.44 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 | 0.53 | 38.0 | 2.68e-01 | 78.9% | 68.1% |
| 4669014 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.53 | 47.0 | 3.40e-01 | 100.0% | 47.9% |
| 3624157 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.21e-01 | 97.4% | 85.3% |
| 4120682 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.52 | 43.0 | 4.02e-01 | 97.4% | 96.0% |
| 4983166 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 44.0 | 3.89e-01 | 98.7% | 80.0% |
| 1789059 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.51 | 43.0 | 3.95e-01 | 96.1% | 85.4% |
| 4321117 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.51 | 44.0 | 3.29e-01 | 100.0% | 46.8% |
| 3678375 | 10.32.1.210 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C | 0.51 | 44.0 | 3.77e-01 | 100.0% | 79.8% |
| 4271892 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 43.0 | 3.76e-01 | 100.0% | 88.0% |
| 3258526 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.60e-01 | 90.8% | 87.0% |
| 4197366 | 10.32.1.265 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29487 | 0.50 | 43.0 | 3.34e-01 | 100.0% | 95.1% |
| 3267385 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.50 | 41.0 | 3.46e-01 | 96.1% | 55.9% |
| 3218244 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.50 | 40.0 | 3.49e-01 | 89.5% | 68.3% |
| 3247656 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.73e-01 | 94.7% | 76.4% |
| 3589748 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 41.0 | 2.80e-01 | 100.0% | 22.9% |