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LC554890.1__BCG50116.1__X__00098

Bact-Vir

LC554890.1__BCG50116.1__X__00098

Identity

Accession:
LC554890 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ralstonia_phage_RP13

TaxID: 2743402

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-206
PDB
Domain cluster: rep: SRR1747023_scaffold_5_prodigal-single.1__X__X__00220__D6-190
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gpcA00 3.90.198.10 Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein 0.68 64.0 5.93e-01 100.0% 88.1%
2e2dC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 33.0 4.42e-01 86.5% 100.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995733 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 65.0 6.39e-01 100.0% 90.0%
3573974 2.1.1.45 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 0.68 63.0 6.15e-01 100.0% 92.1%
378 2.1.1.45 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › gp32 0.67 62.0 5.83e-01 99.4% 90.0%
4927408 2.3.1.0 ↗ beta barrels › OB-fold › TIMP-like › TIMP-like 0.59 34.0 4.03e-01 87.1% 82.5%
3778873 206.1.3.46 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_IQCH 0.56 34.0 3.05e-01 93.8% 41.2%