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LC554890.1__BCG50132.1__X__00114

Bact-Vir

LC554890.1__BCG50132.1__X__00114

Identity

Accession:
LC554890 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ralstonia_phage_RP13

TaxID: 2743402

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
Domain cluster: rep: IMGVR_UViG_3300010353_002273-3300010353-Ga0116236_100250816__D12-64
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6lo8F01 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.69 50.0 5.05e-01 77.9% 84.1%
2gtaA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.62 44.0 3.93e-01 75.0% 74.2%
4zi3D00 1.20.1520.10 Mainly Alpha › Up-down Bundle › Adp-ribosylation factor-like protein 2-binding protein fold › ADP-ribosylation factor-like 2-binding protein, domain 0.60 52.0 4.28e-01 100.0% 65.6%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.58 41.0 4.56e-01 100.0% 96.2%
7tchB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 41.0 2.90e-01 83.8% 52.9%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 45.0 4.34e-01 100.0% 85.2%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.52 45.0 3.85e-01 98.5% 60.4%
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.52 45.0 3.69e-01 97.1% 95.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3656598 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.58 47.0 3.77e-01 100.0% 45.4%
3994858 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.56 38.0 3.59e-01 72.1% 60.0%
4939437 2003.1.1.9 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AdoHcyase_NAD 0.55 40.0 2.78e-01 77.9% 89.5%
3694591 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.53 46.0 3.76e-01 100.0% 53.3%
3541302 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 46.0 3.57e-01 100.0% 77.9%
3786246 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 40.0 3.95e-01 97.1% 80.0%
D2 high residues 77-137
PDB
Domain cluster: rep: MW805361.1__URC15242.1__GD1_118__00118__D34-87