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LC554890.1__BCG50135.1__X__00117
Bact-VirLC554890.1__BCG50135.1__X__00117
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-75
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.69 | 48.0 | 5.25e-01 | 81.5% | 90.4% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 52.0 | 5.47e-01 | 83.1% | 91.2% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 5.08e-01 | 80.0% | 90.4% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 51.0 | 5.21e-01 | 84.6% | 85.5% |
| 1pg5B02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.67 | 47.0 | 4.95e-01 | 73.8% | 94.7% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 49.0 | 4.69e-01 | 81.5% | 78.7% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.64 | 44.0 | 4.85e-01 | 73.8% | 98.1% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.64e-01 | 80.0% | 74.3% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 48.0 | 4.25e-01 | 84.6% | 78.1% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.61 | 47.0 | 4.12e-01 | 81.5% | 62.1% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.24e-01 | 81.5% | 73.7% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 48.0 | 4.32e-01 | 90.8% | 91.1% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 4.04e-01 | 80.0% | 81.4% |
| 3i8tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 41.0 | 3.31e-01 | 84.6% | 85.0% |
| 2i2lB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 4.08e-01 | 86.2% | 79.4% |
| 1qf8A02 | 2.20.25.20 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 38.0 | 3.73e-01 | 78.5% | 86.1% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.52 | 38.0 | 2.79e-01 | 80.0% | 29.8% |
| 2ja2A03 | 1.10.1160.10 | Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 | 0.52 | 34.0 | 3.23e-01 | 100.0% | 53.6% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.85e-01 | 100.0% | 49.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4998148 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 55.0 | 5.88e-01 | 92.3% | 90.9% |
| 4101502 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 49.0 | 5.32e-01 | 80.0% | 88.9% |
| 4963650 | 4.1.1.488 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7346 | 0.69 | 51.0 | 5.49e-01 | 90.8% | 92.7% |
| 4122731 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.69 | 49.0 | 5.09e-01 | 73.8% | 93.2% |
| 3878271 | 101.1.2.284 ↗ | alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd | 0.69 | 50.0 | 3.74e-01 | 81.5% | 32.3% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 49.0 | 5.12e-01 | 84.6% | 81.7% |
| 3581696 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.26e-01 | 80.0% | 94.0% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.68 | 49.0 | 4.78e-01 | 83.1% | 70.0% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.04e-01 | 81.5% | 85.5% |
| 5038213 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.68 | 47.0 | 5.22e-01 | 72.3% | 100.0% |
| 5051702 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.68 | 47.0 | 5.09e-01 | 73.8% | 94.5% |
| 3456496 | 4.1.1.75 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhS | 0.67 | 51.0 | 4.23e-01 | 84.6% | 46.1% |
| 4501723 | 4.8.1.45 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 | 0.67 | 48.0 | 5.21e-01 | 78.5% | 89.1% |
| 3938261 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.67 | 51.0 | 3.87e-01 | 84.6% | 35.3% |
| 4547820 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 51.0 | 4.31e-01 | 84.6% | 50.5% |
| 3415020 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.67 | 51.0 | 4.74e-01 | 84.6% | 66.3% |
| 3561094 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 52.0 | 5.01e-01 | 84.6% | 86.7% |
| 3256432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 50.0 | 5.16e-01 | 81.5% | 86.7% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.64 | 53.0 | 4.01e-01 | 90.8% | 68.4% |
| 3925589 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 4.74e-01 | 81.5% | 91.4% |
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.63 | 52.0 | 4.88e-01 | 90.8% | 83.7% |
| 5067227 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 49.0 | 4.50e-01 | 83.1% | 72.3% |
| 3929784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 45.0 | 5.05e-01 | 80.0% | 100.0% |
| 4932696 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.61 | 48.0 | 4.17e-01 | 86.2% | 63.0% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 46.0 | 3.96e-01 | 90.8% | 52.4% |
| 3854864 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 45.0 | 3.88e-01 | 90.8% | 54.0% |
| 3702861 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.58 | 39.0 | 4.12e-01 | 72.3% | 83.6% |
| 3742502 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.58 | 40.0 | 3.66e-01 | 73.8% | 70.0% |
| 3987498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.32e-01 | 90.8% | 70.6% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 48.0 | 4.31e-01 | 95.4% | 66.7% |
| 3684646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.41e-01 | 90.8% | 81.2% |
| 3942998 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.57 | 38.0 | 3.80e-01 | 70.8% | 100.0% |
| 5044272 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.55 | 37.0 | 3.92e-01 | 72.3% | 90.0% |
| 3920690 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.54 | 31.0 | 3.44e-01 | 73.8% | 72.0% |
| 4014625 | 220.1.1.113 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_11 | 0.53 | 40.0 | 3.19e-01 | 83.1% | 71.5% |
| 3933892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 39.0 | 4.08e-01 | 83.1% | 91.7% |
| 3884605 | 219.1.1.80 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF4796_C | 0.53 | 45.0 | 3.72e-01 | 100.0% | 58.9% |
| 3257922 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.52 | 38.0 | 3.38e-01 | 83.1% | 53.7% |