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LC554890.1__BCG50179.1__X__00161
Bact-VirLC554890.1__BCG50179.1__X__00161
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
94.2
mean pLDDT
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-105
Domain cluster:
rep: MW749006.1__QXN70452.1__AGENTSMITH_46__00046__D4-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14216.13 best | DUF4326 | 45.1 | 1.70e-11 | 95.0% | 81.2% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xrpA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.71 | 50.0 | 4.58e-01 | 84.2% | 56.6% |
| 1oheA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.66 | 53.0 | 4.66e-01 | 100.0% | 59.1% |
| 2ozgA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 35.0 | 3.30e-01 | 88.1% | 50.0% |
| 8a9nA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 37.0 | 3.39e-01 | 85.1% | 49.6% |
| 4g56A01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.55 | 49.0 | 3.58e-01 | 100.0% | 95.7% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 49.0 | 3.72e-01 | 100.0% | 95.8% |
| 1avaA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 45.0 | 3.14e-01 | 91.1% | 56.2% |
| 2dxqA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 35.0 | 3.17e-01 | 86.1% | 46.3% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.86e-01 | 100.0% | 55.6% |
| 4yztA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 48.0 | 3.37e-01 | 100.0% | 95.9% |
| 1mxgA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 43.0 | 3.08e-01 | 91.1% | 60.5% |
| 1m8pA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 3.72e-01 | 100.0% | 52.7% |
| 4xrpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 3.94e-01 | 100.0% | 66.2% |
| 1wdeA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.52 | 47.0 | 4.54e-01 | 100.0% | 87.8% |
| 1gcyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 45.0 | 3.16e-01 | 100.0% | 55.7% |
| 1d2kA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 42.0 | 2.99e-01 | 91.1% | 98.2% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 36.0 | 2.99e-01 | 73.3% | 61.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018591 | 2007.2.3.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DUF488 | 0.78 | 73.0 | 6.08e-01 | 100.0% | 81.2% |
| None | — | 0.64 | 46.0 | 4.94e-01 | 100.0% | 86.4% | |
| 5035955 | 7597.1.1.2 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › GxGYxYP_N | 0.60 | 30.0 | 3.41e-01 | 78.2% | 61.3% |
| 3600200 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 50.0 | 3.91e-01 | 100.0% | 57.3% |
| None | — | 0.56 | 51.0 | 3.86e-01 | 100.0% | 46.4% | |
| 3973021 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 46.0 | 3.93e-01 | 100.0% | 53.8% |
| 4938546 | 2004.1.1.64 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › APS_kinase | 0.55 | 46.0 | 3.77e-01 | 100.0% | 49.2% |
| 3387052 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 48.0 | 4.04e-01 | 97.0% | 72.4% |
| 4927305 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.53 | 48.0 | 4.73e-01 | 100.0% | 90.9% |
| 9768 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.53 | 45.0 | 3.84e-01 | 100.0% | 55.2% |
| 4578029 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.53 | 48.0 | 4.73e-01 | 100.0% | 91.8% |
| 3386933 | 2004.1.1.64 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › APS_kinase | 0.53 | 43.0 | 3.76e-01 | 100.0% | 55.8% |
| 3595484 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 43.0 | 3.55e-01 | 100.0% | 47.9% |
| 3281862 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.53 | 48.0 | 3.38e-01 | 99.0% | 93.0% |
| 3320457 | 2004.1.1.65 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › 6PF2K | 0.53 | 46.0 | 3.51e-01 | 100.0% | 42.0% |
| 5021540 | 7550.1.1.0 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain | 0.52 | 42.0 | 4.29e-01 | 100.0% | 88.0% |
| 3628611 | 2002.1.2.2 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › Glyco_hydro_18 | 0.52 | 44.0 | 3.85e-01 | 92.1% | 96.0% |
| 5049806 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.52 | 45.0 | 3.66e-01 | 100.0% | 51.1% |
| 5008122 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 45.0 | 3.72e-01 | 97.0% | 88.3% |
| 5034734 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 45.0 | 3.40e-01 | 97.0% | 70.2% |