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LC554890.1__BCG50223.1__X__00205
Bact-VirLC554890.1__BCG50223.1__X__00205
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-129
Domain cluster:
rep: ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00306__D6-111
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yelA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 41.0 | 4.34e-01 | 100.0% | 90.2% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 21.0 | 2.97e-01 | 78.5% | 72.7% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.53 | 41.0 | 4.36e-01 | 99.2% | 97.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.74 | 22.0 | 3.37e-01 | 78.5% | 60.0% |
| 5075465 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.70 | 22.0 | 3.15e-01 | 78.5% | 55.0% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 27.0 | 3.20e-01 | 96.7% | 66.3% |
| 4360067 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.54 | 25.0 | 3.04e-01 | 96.7% | 63.3% |
| 5643 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.53 | 27.0 | 3.31e-01 | 82.6% | 78.9% |
| 3650059 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.53 | 29.0 | 3.38e-01 | 78.5% | 76.2% |
| 4020617 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.52 | 39.0 | 2.91e-01 | 79.3% | 92.5% |
| 4950462 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 26.0 | 3.45e-01 | 95.0% | 95.0% |
| 4011588 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.51 | 23.0 | 2.95e-01 | 89.3% | 69.3% |