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LC554890.1__BCG50289.1__X__00271
Bact-VirLC554890.1__BCG50289.1__X__00271
Identity
- Accession:
- LC554890 ↗
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-64
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nrjB01 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.86 | 62.0 | 4.28e-01 | 75.9% | 28.0% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.74 | 52.0 | 4.22e-01 | 88.9% | 40.8% |
| 3p9dG03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.59 | 42.0 | 3.09e-01 | 75.9% | 71.8% |
| 2xgjA05 | 2.40.30.300 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 39.0 | 2.98e-01 | 72.2% | 80.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3503870 | 109.4.1.1814 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2428, TPR_Trm732 | 0.84 | 60.0 | 3.19e-01 | 75.9% | 3.0% |
| 4971062 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.81 | 61.0 | 5.17e-01 | 81.5% | 50.6% |
| 3565991 | 109.4.1.1415 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BCD_RFX | 0.79 | 54.0 | 3.32e-01 | 72.2% | 12.6% |
| 4442740 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.79 | 59.0 | 3.86e-01 | 100.0% | 20.0% |
| 3667265 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.74 | 58.0 | 4.23e-01 | 96.3% | 31.7% |
| 3265965 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.70 | 51.0 | 2.96e-01 | 77.8% | 9.6% |
| 3253985 | 524.1.1.8 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC, RabGap-TBC_2 | 0.70 | 47.0 | 3.24e-01 | 87.0% | 21.1% |
| 3513808 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.69 | 57.0 | 3.62e-01 | 94.4% | 18.5% |
| 3490165 | 109.4.1.3619 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_C | 0.67 | 46.0 | 2.93e-01 | 72.2% | 18.5% |
| 3327381 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.64 | 42.0 | 2.33e-01 | 72.2% | 4.1% |
| 3316467 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.64 | 49.0 | 2.72e-01 | 85.2% | 10.2% |
| 5005687 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.55 | 38.0 | 2.91e-01 | 75.9% | 30.4% |
| 3299745 | 207.1.1.185 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 | 0.54 | 46.0 | 2.80e-01 | 100.0% | 40.5% |