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LC597490.1__BCO16061.1__X__00008

Bact-Vir

LC597490.1__BCO16061.1__X__00008

Identity

Accession:
LC597490 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-111
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 38.0 5.18e-01 77.6% 92.9%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 39.0 5.05e-01 93.5% 100.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.70 37.0 3.82e-01 88.8% 55.4%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 39.0 4.43e-01 86.9% 73.8%
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 37.0 4.65e-01 72.9% 91.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 36.0 4.75e-01 85.0% 96.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 38.0 4.49e-01 86.9% 81.9%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 37.0 4.67e-01 73.8% 95.1%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 38.0 4.41e-01 88.8% 78.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 35.0 4.74e-01 86.0% 100.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 37.0 4.67e-01 73.8% 96.8%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 37.0 4.55e-01 88.8% 91.0%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 30.0 3.66e-01 71.0% 68.6%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 41.0 4.50e-01 88.8% 81.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 36.0 4.45e-01 91.6% 95.2%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.73e-01 94.4% 87.5%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.78e-01 92.5% 90.6%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.67e-01 93.5% 87.5%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.67e-01 92.5% 91.5%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.59e-01 99.1% 80.8%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.90e-01 100.0% 93.3%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 3.84e-01 93.5% 55.8%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 38.0 4.01e-01 90.7% 67.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 36.0 3.89e-01 88.8% 70.1%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 4.02e-01 90.7% 65.1%
2ppxA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 34.0 4.37e-01 97.2% 96.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.51e-01 93.5% 85.6%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 31.0 3.20e-01 72.9% 50.0%
2yskA00 1.10.490.110 Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 0.58 43.0 3.94e-01 100.0% 58.3%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.52e-01 91.6% 96.4%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 4.35e-01 90.7% 96.2%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 4.12e-01 87.9% 84.3%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 33.0 3.99e-01 100.0% 90.0%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 30.0 3.80e-01 79.4% 87.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 30.0 3.73e-01 96.3% 87.7%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 31.0 3.52e-01 83.2% 74.4%
2wtbA03 1.10.1040.50 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.53 45.0 3.74e-01 93.5% 93.3%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 28.0 3.50e-01 89.7% 81.2%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 29.0 3.64e-01 83.2% 88.2%
3bd1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 29.0 3.57e-01 80.4% 89.2%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 30.0 3.83e-01 82.2% 98.4%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 27.0 3.32e-01 87.9% 78.9%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.50 40.0 3.61e-01 84.1% 79.9%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.50 36.0 3.50e-01 75.7% 98.4%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3977377 101.1.2.836 alpha arrays › HTH › HTH › winged helix domain › Terminase_5 0.72 39.0 4.03e-01 89.7% 55.2%
3976506 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.71 39.0 4.60e-01 85.0% 77.3%
5062183 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 44.0 5.07e-01 100.0% 90.7%
3946793 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.67 39.0 3.86e-01 90.7% 53.9%
5005042 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 43.0 4.44e-01 100.0% 68.0%
4966837 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.67 42.0 4.67e-01 100.0% 78.8%
5030004 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.66 42.0 4.21e-01 100.0% 61.8%
5003376 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 42.0 4.61e-01 100.0% 77.8%
3279743 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 40.0 4.82e-01 88.8% 94.3%
3387117 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.65 45.0 5.11e-01 93.5% 96.2%
4991511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 44.0 4.63e-01 99.1% 77.9%
4551350 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.64 42.0 4.49e-01 96.3% 75.8%
3966025 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.64 38.0 4.42e-01 91.6% 83.8%
4988665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 38.0 4.66e-01 88.8% 96.9%
4952541 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 42.0 4.36e-01 100.0% 71.0%
3973740 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 44.0 4.60e-01 92.5% 77.0%
3982869 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 44.0 4.86e-01 93.5% 90.6%
3947249 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 44.0 4.99e-01 97.2% 97.5%
3166394 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 45.0 4.66e-01 92.5% 78.0%
4032354 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 44.0 4.74e-01 93.5% 85.6%
3969371 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.75e-01 93.5% 85.6%
3941586 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 45.0 5.07e-01 97.2% 98.8%
4370821 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 45.0 4.95e-01 96.3% 92.9%
4010187 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 45.0 4.88e-01 97.2% 88.9%
4605333 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.63 44.0 4.86e-01 94.4% 91.8%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 40.0 4.54e-01 93.5% 86.3%
3946019 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.73e-01 97.2% 86.7%
3968396 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 46.0 4.92e-01 100.0% 91.1%
3941460 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.62 35.0 4.30e-01 86.0% 89.2%
4102412 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.73e-01 93.5% 86.7%
3977925 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.62 42.0 4.36e-01 96.3% 73.0%
4297810 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.76e-01 93.5% 87.8%
4988230 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.76e-01 93.5% 86.7%
4934128 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.62 42.0 3.96e-01 100.0% 57.7%
3970001 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.66e-01 93.5% 85.6%
4664006 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 43.0 4.59e-01 93.5% 84.4%
4624372 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.60e-01 94.4% 82.1%
5015226 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 43.0 4.68e-01 93.5% 86.7%
3976137 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 44.0 4.70e-01 93.5% 86.7%
5052214 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 38.0 3.64e-01 96.3% 53.6%
4990518 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.61 34.0 4.27e-01 99.1% 90.8%
3978224 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.61 43.0 4.62e-01 93.5% 86.7%
4267416 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.61 43.0 4.44e-01 93.5% 77.0%
4971221 101.1.6.42 alpha arrays › HTH › HTH › TrpR › HTH_24 0.61 41.0 4.10e-01 100.0% 66.4%
2674112 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.60 41.0 4.52e-01 92.5% 88.1%
5041367 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.60 41.0 3.13e-01 94.4% 27.8%
3282040 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.60 32.0 3.60e-01 80.4% 65.9%
3589834 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.60 32.0 4.05e-01 98.1% 86.2%
5022370 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.60 40.0 4.47e-01 98.1% 91.3%
4032484 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.60 31.0 4.08e-01 98.1% 91.7%
4031147 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.59 32.0 4.23e-01 96.3% 96.7%
4941829 101.1.2.93 alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.59 40.0 3.89e-01 89.7% 62.5%
3989197 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.58 33.0 4.19e-01 99.1% 98.3%
185030 4198.2.1.1 alpha arrays › TerB-like › TTHA1432-like › TTHA1432-like › DUF2267 0.58 43.0 3.94e-01 100.0% 58.3%
3587013 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.58 32.0 4.17e-01 99.1% 96.7%
4998383 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.57 44.0 4.68e-01 92.5% 92.6%
2787 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.56 32.0 4.05e-01 100.0% 92.5%
5011493 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.55 35.0 3.71e-01 86.9% 71.6%
3588951 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.54 29.0 3.78e-01 95.3% 93.3%
3277922 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.54 30.0 3.49e-01 89.7% 77.3%
4537353 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.53 30.0 2.88e-01 84.1% 47.2%
3970175 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.53 31.0 3.91e-01 83.2% 96.9%
3588243 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.52 28.0 3.64e-01 96.3% 95.0%
5013661 101.1.2.895 alpha arrays › HTH › HTH › winged helix domain › DUF2250 0.52 45.0 3.98e-01 96.3% 90.6%
3277653 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.52 31.0 3.52e-01 83.2% 76.5%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.51 29.0 2.96e-01 83.2% 54.5%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.51 31.0 3.28e-01 83.2% 66.3%
3402442 174.1.1.45 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › MENTAL 0.51 35.0 3.02e-01 70.1% 59.4%
3287413 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.51 34.0 3.88e-01 86.0% 91.3%
3954745 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 45.0 3.72e-01 98.1% 76.8%
3963536 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.50 40.0 3.97e-01 86.0% 87.8%