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LC597490.1__BCO16076.1__X__00023
Bact-VirLC597490.1__BCO16076.1__X__00023
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
76.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-61
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zssA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 43.0 | 2.69e-01 | 89.3% | 97.3% |
| 4qbuA01 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 3.31e-01 | 94.6% | 51.9% |
| 1ryqA00 | 2.20.28.90 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 37.0 | 3.68e-01 | 94.6% | 75.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4980022 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 48.0 | 5.06e-01 | 83.9% | 80.0% |
| 4571011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 42.0 | 4.72e-01 | 83.9% | 87.5% |
| 4579287 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.67 | 52.0 | 3.18e-01 | 83.9% | 31.3% |
| 4008953 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 39.0 | 4.62e-01 | 91.1% | 97.1% |
| 4292319 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 51.0 | 2.98e-01 | 94.6% | 17.3% |
| 5024279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 42.0 | 4.57e-01 | 91.1% | 86.7% |
| 5056653 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.60 | 43.0 | 4.67e-01 | 89.3% | 100.0% |
| 4065381 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.57 | 46.0 | 3.06e-01 | 87.5% | 36.2% |
| 3609555 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 47.0 | 4.93e-01 | 100.0% | 100.0% |
| 3360826 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 34.0 | 3.55e-01 | 75.0% | 72.0% |
| 3246875 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.52 | 41.0 | 3.73e-01 | 100.0% | 63.7% |