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LC597490.1__BCO16099.1__X__00046
Bact-VirLC597490.1__BCO16099.1__X__00046
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-92
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.72 | 52.0 | 3.91e-01 | 76.6% | 60.6% |
| 4mspB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 43.0 | 4.43e-01 | 70.1% | 80.0% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.63 | 42.0 | 4.76e-01 | 84.4% | 100.0% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 38.0 | 3.56e-01 | 90.9% | 50.0% |
| 1knzA01 | 6.10.280.20 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain | 0.59 | 41.0 | 3.72e-01 | 79.2% | 53.9% |
| 1ks9A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 39.0 | 3.41e-01 | 72.7% | 92.7% |
| 2x0jA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.56 | 48.0 | 3.85e-01 | 94.8% | 60.5% |
| 3zfvA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 49.0 | 3.95e-01 | 100.0% | 55.8% |
| 1n5uA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 36.0 | 3.40e-01 | 71.4% | 84.5% |
| 2hepA00 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 28.0 | 3.58e-01 | 94.8% | 95.2% |
| 1h3fA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 36.0 | 2.81e-01 | 79.2% | 37.4% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3324564 | 108.1.1.51 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › NADPH_Ox | 0.70 | 49.0 | 3.71e-01 | 72.7% | 56.7% |
| 4445757 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.68 | 50.0 | 5.08e-01 | 76.6% | 84.0% |
| 3911815 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.68 | 50.0 | 5.06e-01 | 76.6% | 84.0% |
| 3521127 | 108.1.1.98 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 | 0.67 | 48.0 | 3.61e-01 | 75.3% | 63.8% |
| 3704289 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 45.0 | 4.51e-01 | 70.1% | 100.0% |
| 3555794 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.66 | 45.0 | 4.38e-01 | 70.1% | 70.6% |
| 4644218 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.65 | 51.0 | 4.99e-01 | 84.4% | 87.1% |
| 3742957 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.64 | 44.0 | 4.80e-01 | 71.4% | 96.7% |
| 3226591 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.63 | 46.0 | 3.78e-01 | 77.9% | 48.6% |
| 3979378 | 5051.1.1.12 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Trp_Tyr_perm | 0.62 | 55.0 | 3.45e-01 | 97.4% | 70.9% |
| 3642427 | 103.1.1.123 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PLAC8 | 0.61 | 39.0 | 3.82e-01 | 70.1% | 58.8% |
| 4033780 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.60 | 45.0 | 3.78e-01 | 77.9% | 81.5% |
| 4029825 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.60 | 42.0 | 4.13e-01 | 74.0% | 85.7% |
| 4527970 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.58 | 42.0 | 3.14e-01 | 76.6% | 85.5% |
| 5058284 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.57 | 48.0 | 3.61e-01 | 97.4% | 73.3% |
| 4991630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 4.33e-01 | 72.7% | 91.7% |
| 3371657 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.56 | 42.0 | 4.06e-01 | 80.5% | 96.7% |
| 3701057 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 42.0 | 3.00e-01 | 81.8% | 55.4% |
| 5005164 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.56 | 43.0 | 3.85e-01 | 83.1% | 95.4% |
| 4460370 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.56 | 38.0 | 3.87e-01 | 70.1% | 100.0% |
| 4037806 | 4002.1.1.5 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › ADH_Fe_C | 0.55 | 42.0 | 3.08e-01 | 81.8% | 51.0% |
| 4604068 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.55 | 38.0 | 3.92e-01 | 72.7% | 94.7% |
| 4325095 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.55 | 43.0 | 3.18e-01 | 85.7% | 94.0% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 38.0 | 3.54e-01 | 75.3% | 75.2% |
| 3740294 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.53 | 41.0 | 3.36e-01 | 85.7% | 71.3% |
| 4464727 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.52 | 38.0 | 3.45e-01 | 83.1% | 56.7% |
| 3868067 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 44.0 | 2.97e-01 | 96.1% | 68.1% |
| 3752445 | 102.1.1.143 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › XTBD | 0.52 | 36.0 | 3.79e-01 | 74.0% | 91.2% |
| 3988383 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.51 | 37.0 | 3.42e-01 | 83.1% | 59.0% |
| 169693 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.51 | 45.0 | 3.29e-01 | 97.4% | 87.4% |
| 4044429 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.50 | 39.0 | 2.86e-01 | 85.7% | 53.9% |
| 3831795 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.50 | 42.0 | 3.12e-01 | 93.5% | 50.2% |