←Back to structures
LC597490.1__BCO16104.1__X__00051
Bact-VirLC597490.1__BCO16104.1__X__00051
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 69-117
Domain cluster:
rep: IMGVR_UViG_3300025669_000046-3300025669-Ga0208904_10002127__D11-57
D2
medium
residues 127-183
Domain cluster:
rep: IMGVR_UViG_3300025669_000046-3300025669-Ga0208904_10002127__D11-57
D3
medium
residues 184-260
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.65 | 52.0 | 4.31e-01 | 89.6% | 76.1% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.58 | 42.0 | 4.18e-01 | 89.6% | 73.2% |
| 4n1kD00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 39.0 | 3.73e-01 | 97.4% | 58.5% |
| 1wj7A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 34.0 | 3.72e-01 | 75.3% | 75.0% |
| 2jujA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.55 | 34.0 | 3.86e-01 | 72.7% | 85.7% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 43.0 | 3.55e-01 | 87.0% | 85.7% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 46.0 | 3.15e-01 | 97.4% | 65.2% |
| 2hg2A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 47.0 | 3.25e-01 | 100.0% | 67.5% |
| 3ju8A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 44.0 | 3.08e-01 | 97.4% | 51.5% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 37.0 | 3.70e-01 | 92.2% | 70.4% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 42.0 | 4.43e-01 | 96.1% | 98.6% |
| 3ogzA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 43.0 | 2.69e-01 | 93.5% | 48.9% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.51 | 44.0 | 4.35e-01 | 97.4% | 93.8% |
| 1iv8A03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.51 | 40.0 | 3.90e-01 | 88.3% | 95.3% |
| 4i3vA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 42.0 | 3.00e-01 | 97.4% | 71.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3611314 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.66 | 38.0 | 4.39e-01 | 76.6% | 80.0% |
| None | — | 0.62 | 50.0 | 4.00e-01 | 88.3% | 97.4% | |
| 4271274 | 225.1.1.28 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › PF29744 | 0.56 | 45.0 | 3.58e-01 | 88.3% | 95.6% |
| 3781465 | 103.1.1.88 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF27606 | 0.54 | 29.0 | 3.26e-01 | 70.1% | 65.0% |
| 4934569 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 41.0 | 3.39e-01 | 85.7% | 99.3% |
| 4136873 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.53 | 28.0 | 3.08e-01 | 70.1% | 60.0% |
| 5044477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 36.0 | 3.30e-01 | 71.4% | 68.0% |
| 5077735 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 44.0 | 3.74e-01 | 94.8% | 75.2% |