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LC597490.1__BCO16140.1__X__00087
Bact-VirLC597490.1__BCO16140.1__X__00087
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
66.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-53
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qybA02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.60 | 45.0 | 3.75e-01 | 89.6% | 44.1% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.60 | 49.0 | 3.88e-01 | 97.9% | 44.2% |
| 4is7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.59 | 41.0 | 3.74e-01 | 93.8% | 51.4% |
| 2cqnA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.58 | 46.0 | 3.88e-01 | 85.4% | 84.4% |
| 3rqzC00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 40.0 | 2.63e-01 | 85.4% | 90.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937067 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.61 | 47.0 | 3.03e-01 | 89.6% | 73.2% |
| 3937737 | 4215.1.1.0 ↗ | alpha arrays › SOCS box-like › SOCS box-like › SOCS box-like | 0.60 | 48.0 | 4.82e-01 | 89.6% | 88.0% |
| 3725440 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 43.0 | 3.55e-01 | 89.6% | 42.1% |
| 4286671 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.55 | 42.0 | 2.94e-01 | 91.7% | 33.9% |
| 3176493 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.55 | 39.0 | 3.17e-01 | 81.2% | 87.6% |
| 3928759 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.52 | 39.0 | 3.45e-01 | 89.6% | 77.5% |
| 3593692 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 38.0 | 2.59e-01 | 89.6% | 21.8% |
| 3821814 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.50 | 33.0 | 3.42e-01 | 91.7% | 71.1% |
D2
high
residues 66-159
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cw5A02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.66 | 48.0 | 4.99e-01 | 88.3% | 80.9% |
| 3iylW05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 50.0 | 5.04e-01 | 97.9% | 84.4% |
| 2q6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.63 | 50.0 | 4.87e-01 | 89.4% | 78.6% |
| 4g0bA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.61 | 50.0 | 3.99e-01 | 91.5% | 68.3% |
| 5b6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.61 | 49.0 | 4.78e-01 | 89.4% | 81.3% |
| 8shiI01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 53.0 | 5.21e-01 | 97.9% | 89.4% |
| 1vknA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.61 | 43.0 | 3.54e-01 | 73.4% | 81.8% |
| 5du9B02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.61 | 50.0 | 3.94e-01 | 93.6% | 93.5% |
| 5i0dA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 51.0 | 4.48e-01 | 91.5% | 80.6% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.60 | 41.0 | 3.96e-01 | 88.3% | 60.4% |
| 7r9xA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.60 | 49.0 | 3.75e-01 | 91.5% | 81.2% |
| 2vsqA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.60 | 50.0 | 3.78e-01 | 93.6% | 79.1% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.60 | 47.0 | 4.80e-01 | 88.3% | 87.2% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.59 | 48.0 | 4.71e-01 | 88.3% | 81.4% |
| 1ah1A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.68e-01 | 97.9% | 75.2% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 38.0 | 4.37e-01 | 92.6% | 91.2% |
| 8dqoB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.59 | 49.0 | 3.96e-01 | 91.5% | 71.8% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.85e-01 | 97.9% | 78.8% |
| 3fk5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 40.0 | 3.59e-01 | 71.3% | 96.4% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 49.0 | 4.26e-01 | 93.6% | 85.1% |
| 4amwA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 49.0 | 4.20e-01 | 91.5% | 91.2% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.58 | 43.0 | 4.35e-01 | 100.0% | 78.7% |
| 2g17A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 44.0 | 3.69e-01 | 80.9% | 81.2% |
| 8gf5C01 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 52.0 | 4.54e-01 | 100.0% | 97.2% |
| 7yteC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.83e-01 | 97.9% | 87.1% |
| 4nofB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.76e-01 | 97.9% | 84.9% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 4.48e-01 | 97.9% | 94.7% |
| 1ulvA04 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 50.0 | 3.73e-01 | 97.9% | 83.0% |
| 4zxhA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 48.0 | 4.01e-01 | 94.7% | 74.1% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.57 | 44.0 | 3.90e-01 | 100.0% | 56.9% |
| 2bghA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.56 | 50.0 | 3.92e-01 | 100.0% | 95.1% |
| 3v0dA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 49.0 | 4.32e-01 | 100.0% | 93.0% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.17e-01 | 96.8% | 70.3% |
| 5anpA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.55 | 41.0 | 3.62e-01 | 79.8% | 80.7% |
| 2j1vA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 41.0 | 3.65e-01 | 100.0% | 54.6% |
| 5t3eB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 44.0 | 3.66e-01 | 92.6% | 69.2% |
| 2pmbA01 | 3.30.1850.10 | Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like | 0.53 | 43.0 | 4.18e-01 | 90.4% | 91.6% |
| 1a94A00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.53 | 41.0 | 4.04e-01 | 89.4% | 78.8% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.69e-01 | 100.0% | 56.6% |
| 1g43A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.51 | 45.0 | 3.83e-01 | 100.0% | 70.6% |
| 6orhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.88e-01 | 89.4% | 73.5% |
| 5kckA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.50 | 41.0 | 2.69e-01 | 90.4% | 52.2% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.50 | 38.0 | 3.51e-01 | 98.9% | 61.1% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2096156 | 4178.1.1.1 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 | 0.70 | 48.0 | 4.09e-01 | 89.4% | 43.5% |
| 5025598 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.69 | 50.0 | 4.55e-01 | 88.3% | 55.4% |
| 4015259 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.68 | 56.0 | 4.45e-01 | 90.4% | 65.3% |
| 3686526 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.66 | 56.0 | 4.08e-01 | 94.7% | 78.9% |
| 5057553 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.65 | 50.0 | 5.11e-01 | 88.3% | 85.6% |
| 4019342 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.65 | 54.0 | 4.50e-01 | 91.5% | 72.1% |
| 5023349 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.64 | 50.0 | 4.92e-01 | 88.3% | 78.0% |
| 4310302 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.64 | 54.0 | 4.08e-01 | 93.6% | 80.4% |
| 4309515 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.63 | 53.0 | 3.98e-01 | 92.6% | 78.3% |
| 3634412 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.63 | 53.0 | 3.94e-01 | 93.6% | 84.3% |
| 4345388 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.63 | 53.0 | 3.95e-01 | 93.6% | 83.9% |
| 4121415 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.63 | 53.0 | 4.26e-01 | 94.7% | 90.8% |
| 4390150 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.63 | 53.0 | 3.85e-01 | 93.6% | 79.3% |
| 3420224 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.63 | 52.0 | 3.96e-01 | 91.5% | 67.4% |
| 5049603 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 51.0 | 4.96e-01 | 89.4% | 82.9% |
| 4505973 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.62 | 52.0 | 3.88e-01 | 94.7% | 81.5% |
| 3480923 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 48.0 | 4.51e-01 | 100.0% | 67.8% |
| 3814950 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 48.0 | 4.79e-01 | 100.0% | 81.1% |
| 4000793 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 53.0 | 5.04e-01 | 97.9% | 81.8% |
| 5035333 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.62 | 49.0 | 4.84e-01 | 89.4% | 81.0% |
| 4996262 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 49.0 | 4.82e-01 | 88.3% | 80.0% |
| 4930219 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 47.0 | 4.69e-01 | 88.3% | 77.8% |
| 4356528 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 46.0 | 4.64e-01 | 88.3% | 78.9% |
| 3407044 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 47.0 | 4.92e-01 | 100.0% | 90.6% |
| 4196487 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.61 | 51.0 | 4.09e-01 | 93.6% | 90.3% |
| 3724904 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.61 | 50.0 | 3.76e-01 | 92.6% | 84.4% |
| 4351586 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.61 | 51.0 | 3.81e-01 | 94.7% | 82.8% |
| 4032846 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.60 | 48.0 | 4.58e-01 | 86.2% | 80.0% |
| 3546967 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 48.0 | 4.27e-01 | 100.0% | 60.8% |
| 4973676 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.60 | 47.0 | 4.66e-01 | 88.3% | 79.0% |
| 2475322 | 4178.1.1.1 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 | 0.60 | 50.0 | 4.25e-01 | 90.4% | 87.7% |
| 3880784 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 48.0 | 4.86e-01 | 100.0% | 87.1% |
| 3202695 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.60 | 49.0 | 3.70e-01 | 91.5% | 76.8% |
| 3557267 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.60 | 51.0 | 4.91e-01 | 95.7% | 81.8% |
| 4949489 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.59 | 47.0 | 4.94e-01 | 97.9% | 96.5% |
| 3602123 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.59 | 44.0 | 4.73e-01 | 97.9% | 96.2% |
| 3291471 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.59 | 48.0 | 3.60e-01 | 91.5% | 79.6% |
| 4586555 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 49.0 | 3.80e-01 | 92.6% | 80.9% |
| 4679897 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.59 | 48.0 | 3.79e-01 | 91.5% | 79.5% |
| 5069810 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.58 | 44.0 | 4.67e-01 | 96.8% | 93.8% |
| 3846901 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.58 | 45.0 | 4.62e-01 | 88.3% | 87.8% |
| 1383 | 11.1.1.133 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_C | 0.57 | 50.0 | 3.74e-01 | 97.9% | 83.7% |
| 3518079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.70e-01 | 97.9% | 88.0% |
| 4929910 | 304.35.1.3 ↗ | a+b two layers › Alpha-beta plaits › Methyl-coenzyme M reductase subunits › Methyl-coenzyme M reductase subunits › MCR_beta_N | 0.57 | 51.0 | 4.00e-01 | 100.0% | 75.0% |
| 4477608 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.57 | 46.0 | 3.74e-01 | 91.5% | 64.6% |
| 3900074 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.87e-01 | 100.0% | 90.5% |
| 4050561 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.57 | 48.0 | 3.53e-01 | 94.7% | 87.9% |
| 4937398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 38.0 | 4.16e-01 | 89.4% | 88.0% |
| 4419876 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.55 | 44.0 | 3.15e-01 | 87.2% | 85.7% |
| 3511056 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 47.0 | 3.81e-01 | 100.0% | 57.9% |
| 3924247 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.54 | 34.0 | 3.77e-01 | 83.0% | 80.0% |
| 3630503 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 32.0 | 3.43e-01 | 84.0% | 68.2% |
| 3863519 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.53 | 45.0 | 4.38e-01 | 96.8% | 87.6% |
| 3398876 | 7579.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase | 0.52 | 40.0 | 2.58e-01 | 86.2% | 28.2% |
| 3665168 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.52 | 45.0 | 4.21e-01 | 100.0% | 90.8% |
| 5002344 | 304.51.1.11 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_N | 0.52 | 45.0 | 4.38e-01 | 100.0% | 89.5% |
| 3653845 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.51 | 44.0 | 3.69e-01 | 100.0% | 58.8% |
| 3672960 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.50 | 42.0 | 3.65e-01 | 95.7% | 82.6% |
D3
high
residues 400-530
D4
medium
residues 163-265
Domain cluster:
representative
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057835 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.55 | 48.0 | 4.14e-01 | 98.1% | 86.5% |
| 4656125 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.55 | 49.0 | 4.02e-01 | 100.0% | 86.2% |
| 5028994 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 45.0 | 3.86e-01 | 98.1% | 84.6% |
| 4156925 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 45.0 | 3.88e-01 | 100.0% | 85.1% |
| 4137969 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 46.0 | 3.86e-01 | 100.0% | 81.7% |
| 4930514 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 45.0 | 3.86e-01 | 100.0% | 86.9% |
| 5028520 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 46.0 | 3.88e-01 | 100.0% | 84.6% |
| 4417174 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 36.0 | 2.99e-01 | 72.8% | 99.5% |
| 5055491 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 44.0 | 3.90e-01 | 98.1% | 86.3% |