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LC597490.1__BCO16143.1__X__00090
Bact-VirLC597490.1__BCO16143.1__X__00090
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
71.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-94
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.80 | 60.0 | 5.92e-01 | 82.5% | 75.0% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.70 | 49.0 | 4.11e-01 | 80.7% | 43.3% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.70 | 51.0 | 3.97e-01 | 77.2% | 43.0% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.70 | 61.0 | 4.03e-01 | 100.0% | 80.0% |
| 4nkbB02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.68 | 50.0 | 4.29e-01 | 82.5% | 50.0% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.68 | 55.0 | 4.03e-01 | 89.5% | 50.3% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 50.0 | 4.09e-01 | 82.5% | 44.9% |
| 3m2tA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 57.0 | 4.23e-01 | 100.0% | 96.7% |
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.65 | 50.0 | 4.17e-01 | 82.5% | 50.5% |
| 1wycA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 54.0 | 3.56e-01 | 100.0% | 78.4% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.57 | 49.0 | 4.19e-01 | 98.2% | 84.0% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.57 | 49.0 | 3.73e-01 | 100.0% | 96.6% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 41.0 | 2.64e-01 | 82.5% | 51.0% |
| 5vqjA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.56 | 39.0 | 2.73e-01 | 75.4% | 94.9% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 46.0 | 2.96e-01 | 96.5% | 88.7% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 38.0 | 3.52e-01 | 73.7% | 55.3% |
| 3qr8A02 | 6.20.150.10 | Special › Other non-globular › Chondroitinase Ac; Chain A, domain 3 › | 0.54 | 42.0 | 3.86e-01 | 84.2% | 72.6% |
| 3k1lA02 | 3.30.457.30 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.53 | 44.0 | 3.91e-01 | 100.0% | 77.8% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.53 | 37.0 | 3.00e-01 | 73.7% | 40.7% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 44.0 | 3.76e-01 | 100.0% | 81.2% |
| 1bxgA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.52 | 39.0 | 3.01e-01 | 82.5% | 79.3% |
| 3qguA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 36.0 | 2.77e-01 | 73.7% | 66.7% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 36.0 | 3.42e-01 | 98.2% | 61.6% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4849380 | 79.1.1.37 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › PF30765 | 0.87 | 66.0 | 4.70e-01 | 80.7% | 33.5% |
| 3311264 | 79.1.1.27 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › MORN | 0.78 | 59.0 | 5.18e-01 | 82.5% | 65.9% |
| 3717674 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.73 | 52.0 | 4.45e-01 | 80.7% | 47.8% |
| 3619159 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.72 | 53.0 | 4.42e-01 | 78.9% | 46.3% |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.71 | 54.0 | 4.19e-01 | 82.5% | 37.6% |
| 3279025 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.70 | 53.0 | 3.45e-01 | 82.5% | 18.4% |
| 3272708 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.69 | 51.0 | 4.56e-01 | 82.5% | 56.2% |
| 3744814 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.68 | 55.0 | 4.81e-01 | 91.2% | 74.4% |
| 4120507 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.67 | 50.0 | 4.23e-01 | 80.7% | 47.4% |
| 3935058 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.66 | 50.0 | 4.36e-01 | 80.7% | 55.3% |
| 3875597 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.66 | 57.0 | 3.47e-01 | 100.0% | 36.4% |
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.64 | 55.0 | 4.14e-01 | 100.0% | 80.7% |
| 4797891 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.63 | 47.0 | 4.46e-01 | 82.5% | 66.7% |
| 3177260 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.63 | 53.0 | 3.54e-01 | 94.7% | 60.9% |
| 3924468 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 48.0 | 3.01e-01 | 86.0% | 22.8% |
| 4386761 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.61 | 45.0 | 3.83e-01 | 82.5% | 46.0% |
| 3676249 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.61 | 46.0 | 3.83e-01 | 84.2% | 60.9% |
| 3715045 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.60 | 45.0 | 4.24e-01 | 82.5% | 67.1% |
| 3900097 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.59 | 52.0 | 3.97e-01 | 100.0% | 63.0% |
| 3715799 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.58 | 45.0 | 2.67e-01 | 86.0% | 10.8% |
| 1443135 | 3321.1.1.2 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › DNA_pol_B_N | 0.58 | 50.0 | 4.05e-01 | 100.0% | 63.7% |
| 3811678 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 44.0 | 3.63e-01 | 84.2% | 61.1% |
| 4203230 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.57 | 40.0 | 2.88e-01 | 78.9% | 23.2% |
| 4025576 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 39.0 | 2.60e-01 | 78.9% | 18.8% |
| 3806422 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.54 | 41.0 | 3.76e-01 | 89.5% | 74.1% |
| 3298515 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 37.0 | 3.10e-01 | 77.2% | 49.6% |
| 3326519 | 331.23.1.7 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C | 0.53 | 41.0 | 3.79e-01 | 89.5% | 78.8% |
| 3306545 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.52 | 42.0 | 3.77e-01 | 93.0% | 74.1% |
| 5017777 | 289.1.1.2 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Zn_protease | 0.51 | 37.0 | 2.83e-01 | 86.0% | 72.4% |